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Update README.md #74

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Aug 26, 2022
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Update README.md #74

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48c0239
Update README.md
tomchor Aug 25, 2022
666f5e2
pass documentation build
Yujie-W Aug 26, 2022
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4 changes: 2 additions & 2 deletions Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -22,8 +22,8 @@ Conda = "1.5.2"
DocStringExtensions = "0.8.5, 0.9.0"
HTTP = "0.9.14, 1.0.5"
JSON = "0.21.2"
NetcdfIO = "0.1.2, 0.2"
PkgUtility = "0.1.13, 0.2.0"
NetcdfIO = "0.2.5"
PkgUtility = "0.2.0"
ProgressMeter = "1.7.1"
PyCall = "1.92.3"
julia = "1.6"
8 changes: 6 additions & 2 deletions README.md
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Expand Up @@ -21,8 +21,12 @@


## Credits
Developers and/or maintainers have invested a lot of time into this project. Since GriddingMachine.jl has not yet been published, if you use GriddingMachine in your publications, please consider
sharing authorship with us.
Please cite our paper(s) when you use GriddingMachine:

- Y. Wang, P. Köhler, R. K. Braghiere, M. Longo, R. Doughty, A. A. Bloom, and C. Frankenberg. 2022.
GriddingMachine, a database and software for Earth system modeling at global and regional scales.
Scientific Data. 9: 258.
[DOI](https://doi.org/10.1038/s41597-022-01346-x)


## About
Expand Down
117 changes: 74 additions & 43 deletions docs/Manifest.toml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,8 @@
# This file is machine-generated - editing it directly is not advised

julia_version = "1.7.3"
julia_version = "1.8.0"
manifest_format = "2.0"
project_hash = "d479fe08211e4c0bb2d2d6659d4adcc40a33a477"

[[deps.ANSIColoredPrinters]]
git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c"
Expand All @@ -10,6 +11,7 @@ version = "0.0.1"

[[deps.ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
version = "1.1.1"

[[deps.Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
Expand Down Expand Up @@ -37,15 +39,15 @@ version = "0.10.4"

[[deps.ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "9489214b993cd42d17f44c36e359bf6a7c919abf"
git-tree-sha1 = "80ca332f6dcb2508adba68f22f551adb2d00a624"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.15.0"
version = "1.15.3"

[[deps.ChangesOfVariables]]
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git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8"
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version = "0.1.3"
version = "0.1.4"

[[deps.CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
Expand All @@ -55,13 +57,14 @@ version = "0.7.0"

[[deps.Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "9be8be1d8a6f44b96482c8af52238ea7987da3e3"
git-tree-sha1 = "78bee250c6826e1cf805a88b7f1e86025275d208"
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version = "0.5.2+0"

[[deps.Conda]]
deps = ["Downloads", "JSON", "VersionParsing"]
Expand Down Expand Up @@ -116,19 +119,20 @@ version = "0.8.6"

[[deps.Documenter]]
deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"]
git-tree-sha1 = "f7809f532671564e48cd81627ddcfb1ba670f87d"
git-tree-sha1 = "6030186b00a38e9d0434518627426570aac2ef95"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "0.27.19"
version = "0.27.23"

[[deps.Downloads]]
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uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
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[[deps.FilePathsBase]]
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git-tree-sha1 = "316daa94fad0b7a008ebd573e002efd6609d85ac"
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version = "0.9.19"

[[deps.FileWatching]]
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Expand All @@ -151,15 +155,15 @@ version = "0.2.7"

[[deps.HDF5_jll]]
deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"]
git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c"
git-tree-sha1 = "c003b31e2e818bc512b0ff99d7dce03b0c1359f5"
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version = "1.12.2+1"

[[deps.HTTP]]
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git-tree-sha1 = "bd11d3220f89382f3116ed34c92badaa567239c9"
git-tree-sha1 = "071bc27ca07f09c1692389e9034acb816c754402"
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version = "1.3.2"

[[deps.IOCapture]]
deps = ["Logging", "Random"]
Expand All @@ -174,9 +178,9 @@ version = "0.5.1"

[[deps.InlineStrings]]
deps = ["Parsers"]
git-tree-sha1 = "a8671d5c9670a62cb36b7d44c376bdb09181aa26"
git-tree-sha1 = "d19f9edd8c34760dca2de2b503f969d8700ed288"
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version = "1.1.3"
version = "1.1.4"

[[deps.InteractiveUtils]]
deps = ["Markdown"]
Expand Down Expand Up @@ -222,10 +226,12 @@ uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"
[[deps.LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
version = "0.6.3"

[[deps.LibCURL_jll]]
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
version = "7.84.0+0"

[[deps.LibGit2]]
deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
Expand All @@ -234,10 +240,17 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
[[deps.LibSSH2_jll]]
deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
version = "1.10.2+0"

[[deps.Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[deps.Libiconv_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "42b62845d70a619f063a7da093d995ec8e15e778"
uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531"
version = "1.16.1+1"

[[deps.LinearAlgebra]]
deps = ["Libdl", "libblastrampoline_jll"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
Expand All @@ -250,9 +263,9 @@ version = "2.13.4"

[[deps.LogExpFunctions]]
deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "09e4b894ce6a976c354a69041a04748180d43637"
git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.15"
version = "0.3.18"

[[deps.Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
Expand All @@ -274,14 +287,15 @@ deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[deps.MbedTLS]]
deps = ["Dates", "MbedTLS_jll", "Random", "Sockets"]
git-tree-sha1 = "1c38e51c3d08ef2278062ebceade0e46cefc96fe"
deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "Random", "Sockets"]
git-tree-sha1 = "2f0be365951a88dfb084f754005177e6dfb00ed0"
uuid = "739be429-bea8-5141-9913-cc70e7f3736d"
version = "1.0.3"
version = "1.1.4"

[[deps.MbedTLS_jll]]
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uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
version = "2.28.0+0"

[[deps.Missings]]
deps = ["DataAPI"]
Expand All @@ -294,37 +308,40 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[deps.MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
version = "2022.2.1"

[[deps.NCDatasets]]
deps = ["CFTime", "DataStructures", "Dates", "NetCDF_jll", "Printf"]
git-tree-sha1 = "17e39eb5bbe564f48bdbefbd103bd3f49fcfcb9b"
deps = ["CFTime", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"]
git-tree-sha1 = "16463e1587495780aa05e05440f16959042bfcb1"
uuid = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
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version = "0.12.7"

[[deps.NetCDF_jll]]
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git-tree-sha1 = "598f1a5e9829b3e57f233f98b34a22b376dff373"
deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"]
git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221"
uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3"
version = "400.702.402+0"
version = "400.902.5+1"

[[deps.NetcdfIO]]
deps = ["DataFrames", "DocStringExtensions", "NCDatasets", "Test"]
git-tree-sha1 = "cf674f801f7230cdc12c9a3486713017f730d17b"
deps = ["DataFrames", "DocStringExtensions", "NCDatasets", "NetCDF_jll", "Test"]
git-tree-sha1 = "bbad13bf11d78b9f02ecb4d5a9515a8a0ec762f9"
uuid = "6a36f34d-89cf-423a-87c4-84549e82f670"
version = "0.2.3"
version = "0.2.5"

[[deps.NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
version = "1.2.0"

[[deps.OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
version = "0.3.20+0"

[[deps.OpenSSL_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "9a36165cf84cff35851809a40a928e1103702013"
git-tree-sha1 = "e60321e3f2616584ff98f0a4f18d98ae6f89bbb3"
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[[deps.OrderedCollections]]
git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c"
Expand All @@ -340,6 +357,7 @@ version = "2.3.2"
[[deps.Pkg]]
deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
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version = "1.8.0"

[[deps.PkgUtility]]
deps = ["CLIMAParameters", "CSV", "DataFrames", "Dates", "DocStringExtensions", "LazyArtifacts", "Pkg", "Statistics", "StatsBase", "Test"]
Expand Down Expand Up @@ -377,9 +395,9 @@ version = "1.7.2"

[[deps.PyCall]]
deps = ["Conda", "Dates", "Libdl", "LinearAlgebra", "MacroTools", "Serialization", "VersionParsing"]
git-tree-sha1 = "1fc929f47d7c151c839c5fc1375929766fb8edcc"
git-tree-sha1 = "53b8b07b721b77144a0fbbbc2675222ebf40a02d"
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[[deps.REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
Expand All @@ -396,6 +414,7 @@ version = "1.2.2"

[[deps.SHA]]
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version = "0.7.0"

[[deps.SentinelArrays]]
deps = ["Dates", "Random"]
Expand Down Expand Up @@ -434,19 +453,20 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[deps.StatsAPI]]
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git-tree-sha1 = "2c11d7290036fe7aac9038ff312d3b3a2a5bf89e"
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[[deps.TableTraits]]
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Expand All @@ -463,21 +483,22 @@ version = "1.7.0"
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Expand All @@ -497,18 +518,28 @@ git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23"
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