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Update steady state solver notebook #2582

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dweindl opened this issue Nov 10, 2024 · 0 comments
Open

Update steady state solver notebook #2582

dweindl opened this issue Nov 10, 2024 · 0 comments
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documentation steady state Related to steady-state computation or sensitivity at steady state

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@dweindl
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dweindl commented Nov 10, 2024

https://amici.readthedocs.io/en/latest/ExampleEquilibrationLogic.html is pretty outdated.

@plakrisenko started updating that in https://github.com/AMICI-dev/AMICI/tree/steady_state_documentation

We need to finish that.

We might want to include this overview figure https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0312148

For updating the flowchart, see also #1073 (comment).

Ideally, we'd address #2080 beforehand.

@dweindl dweindl added the steady state Related to steady-state computation or sensitivity at steady state label Nov 10, 2024
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