Read tabix indexed BED file?

[cademirch]

Quick question that I'm probably missing the obvious answer but am in too deep to see it. Any chance for an example on how to read a tabix indexed bed file? Its not clear to me how to achieve this given the examples for both the tabix reader and bed reader.

Thanks!

[zaeleus]

The BED reader currently doesn't have a convenient method to query in the input. However, you can compose your own query (csi::io::Query) with a BED reader (bed::io::Reader) using existing componenets as a workaround. I added an example of this at noodles-bed/examples/bed_query.rs.

[cademirch]

Awesome. Thank you so much @zaeleus! This is very helpful - both for my project, and learning Rust.