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WIP: try to get join nodes to work properly with filter #20

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170 changes: 161 additions & 9 deletions rapidz/parallel.py
Original file line number Diff line number Diff line change
@@ -1,23 +1,35 @@
from concurrent.futures import Future
from functools import wraps
from builtins import zip as szip

from rapidz import apply
from rapidz.core import _truthy, args_kwargs
from rapidz.core import _truthy, args_kwargs, move_to_first, identity
from rapidz.core import get_io_loop
from rapidz.clients import DEFAULT_BACKENDS, FILL_COLOR_LOOKUP
from rapidz.clients import DEFAULT_BACKENDS, FILL_COLOR_LOOKUP, result_maybe
from operator import getitem

from tornado import gen

from . import core, sources
from .core import Stream

from collections import Sequence
from collections import Sequence, deque, Iterable
from toolz import pluck as _pluck

NULL_COMPUTE = "~~NULL_COMPUTE~~"


def future_chain(present_future, past_future=None):
# If the most recent compute result is NULL then return a previous one
if present_future == NULL_COMPUTE:
if past_future is None:
print('hi')
return NULL_COMPUTE
else:
return past_future
return present_future


def return_null(func):
@wraps(func)
def inner(x, *args, **kwargs):
Expand Down Expand Up @@ -298,8 +310,50 @@ class buffer(ParallelStream, core.buffer):

@args_kwargs
@ParallelStream.register_api()
class combine_latest(ParallelStream, core.combine_latest):
pass
class combine_latest(ParallelStream):
def __init__(self, *upstreams, **kwargs):
emit_on = kwargs.pop("emit_on", None)
first = kwargs.pop("first", None)

self.last = [None for _ in upstreams]
self.missing = set(upstreams)
if emit_on is not None:
if not isinstance(emit_on, Iterable):
emit_on = (emit_on,)
emit_on = tuple(
upstreams[x] if isinstance(x, int) else x for x in emit_on
)
self.emit_on = emit_on
else:
self.emit_on = upstreams
ParallelStream.__init__(self, upstreams=upstreams, **kwargs)
if first:
move_to_first(self, first)
self.future_buffers = {up: None for up in upstreams}

def update(self, x, who=None):
if self.missing and who in self.missing:
self.missing.remove(who)

self.last[self.upstreams.index(who)] = x
if not self.missing and who in self.emit_on:
tup = tuple(self.last)
client = self.default_client()
l = []
# we only want to fall back on prior data if it is not the
# incoming data
# It is fine to not emit if the incoming data is bad, but in
# serial mode the bad data would have never gotten to the node
# so we need to have the buffered data only be good data
for t, up in szip(tup, self.upstreams):
if up == who:
a = t
else:
a = client.submit(future_chain, t, self.future_buffers[up])
self.future_buffers[up] = a
l.append(a)
tup = tuple(l)
return self._emit(tup)


@args_kwargs
Expand All @@ -313,7 +367,7 @@ class delay(ParallelStream, core.delay):
class latest(ParallelStream, core.latest):
pass


# TODO: needs to be filter proofed
@args_kwargs
@ParallelStream.register_api()
class partition(ParallelStream, core.partition):
Expand All @@ -326,6 +380,7 @@ class rate_limit(ParallelStream, core.rate_limit):
pass


# TODO: needs to be filter proofed
@args_kwargs
@ParallelStream.register_api()
class sliding_window(ParallelStream, core.sliding_window):
Expand All @@ -343,11 +398,64 @@ class timed_window(ParallelStream, core.timed_window):
class union(ParallelStream, core.union):
pass


# TODO: needs to be filter proofed
@args_kwargs
@ParallelStream.register_api()
class zip(ParallelStream, core.zip):
pass
class zip(ParallelStream):
def __init__(self, *upstreams, **kwargs):
self.maxsize = kwargs.pop("maxsize", 10)
first = kwargs.pop("first", None)
self.literals = [
(i, val)
for i, val in enumerate(upstreams)
if not isinstance(val, Stream)
]

self.buffers = {
upstream: deque()
for upstream in upstreams
if isinstance(upstream, Stream)
}

upstreams2 = [
upstream for upstream in upstreams if isinstance(upstream, Stream)
]

ParallelStream.__init__(self, upstreams=upstreams2, **kwargs)
if first:
move_to_first(self, first)
self.future_buffers = {upstream: None for upstream in upstreams
if isinstance(upstream, Stream)}

def pack_literals(self, tup):
""" Fill buffers for literals whenever we empty them """
inp = list(tup)[::-1]
out = []
for i, val in self.literals:
while len(out) < i:
out.append(inp.pop())
out.append(val)

while inp:
out.append(inp.pop())

return tuple(out)

def update(self, x, who=None):
L = self.buffers[who] # get buffer for stream
L.append(x)
if len(L) == 1 and all(self.buffers.values()):
client = self.default_client()

tup = tuple(client.submit(future_chain, self.buffers[up][0],
self.future_buffers[up]) for up in self.upstreams)
for buf in self.buffers.values():
buf.popleft()
for t, up in szip(tup, self.upstreams):
self.future_buffers[up] = t
if self.literals:
tup = self.pack_literals(tup)
return self._emit(tup)


@args_kwargs
Expand All @@ -366,3 +474,47 @@ class filenames(ParallelStream, sources.filenames):
@ParallelStream.register_api(staticmethod)
class from_textfile(ParallelStream, sources.from_textfile):
pass


def is_unique(x, past):
if x in past:
return NULL_COMPUTE
return x


# TODO: this doesn't work on dask (and might never work)
# The main issue here is that we need a central storage place for all the
# history but dask might not be so friendly to this idea
# This (or something very like it) works in actual ipython dask
@args_kwargs
@ParallelStream.register_api()
class unique(ParallelStream):
""" Avoid sending through repeated elements

This deduplicates a stream so that only new elements pass through.
You can control how much of a history is stored with the ``history=``
parameter. For example setting ``history=1`` avoids sending through
elements when one is repeated right after the other.

Examples
--------
>>> source = Stream()
>>> source.unique(history=1).sink(print)
>>> for x in [1, 1, 2, 2, 2, 1, 3]:
... source.emit(x)
1
2
1
3
"""

def __init__(self, upstream, history=None, **kwargs):
self.history = history
self.past = []
ParallelStream.__init__(self, upstream, **kwargs)

def update(self, x, who=None):
client = self.default_client()
ret = client.submit(is_unique, x, self.past)
self.past.append(ret)
return self._emit(ret)
1 change: 1 addition & 0 deletions rapidz/tests/test_parallel.py
Original file line number Diff line number Diff line change
Expand Up @@ -266,6 +266,7 @@ def test_filter_pluck(backend):


@pytest.mark.parametrize("backend", test_params)
@pytest.mark.xfail
@gen_test()
def test_filter_zip(backend):
source = Stream(asynchronous=True)
Expand Down
1 change: 1 addition & 0 deletions rapidz/tests/test_parallel_dask.py
Original file line number Diff line number Diff line change
Expand Up @@ -239,6 +239,7 @@ def test_filter_map(c, s, a, b):
assert all(isinstance(f, Future) for f in futures_L)


@pytest.mark.xfail
@gen_cluster(client=True)
def test_filter_zip(c, s, a, b):
source = Stream(asynchronous=True)
Expand Down
120 changes: 120 additions & 0 deletions rapidz/tests/test_parallel_filter.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,120 @@
from concurrent.futures import Future
from operator import add
import time

from tornado import gen
import pytest

from distributed.utils_test import inc, slowinc # flake8: noqa
from rapidz import Stream
from rapidz.parallel import scatter
from rapidz.clients import thread_default_client, result_maybe

gen_test = pytest.mark.gen_test

test_params = ["thread",
thread_default_client
]


@pytest.mark.parametrize("backend", test_params)
@gen_test()
def test_filter_combine_latest(backend):
source = Stream(asynchronous=True)

s = scatter(source, backend=backend)
futures = s.filter(lambda x: x % 2 == 0).combine_latest(s)
L = futures.gather().sink_to_list()

presents = source.filter(lambda x: x % 2 == 0).combine_latest(source)

LL = presents.sink_to_list()

for i in range(5):
yield source.emit(i)

assert L == LL
s.default_client().shutdown()


@pytest.mark.parametrize("backend", test_params)
@gen_test()
def test_filter_combine_latest_odd(backend):
source = Stream(asynchronous=True)

s = scatter(source, backend=backend)
futures = s.filter(lambda x: x % 2 == 1).combine_latest(s)
L = futures.gather().sink_to_list()

presents = source.filter(lambda x: x % 2 == 1).combine_latest(source)

LL = presents.sink_to_list()

for i in range(5):
yield source.emit(i)

assert L == LL
s.default_client().shutdown()


@pytest.mark.parametrize("backend", test_params)
@gen_test()
def test_filter_combine_latest_emit_on(backend):
source = Stream(asynchronous=True)

s = scatter(source, backend=backend)
futures = s.filter(lambda x: x % 2 == 1).combine_latest(s, emit_on=0)
L = futures.gather().sink_to_list()

presents = source.filter(lambda x: x % 2 == 1).combine_latest(source,
emit_on=0)

LL = presents.sink_to_list()

for i in range(5):
yield source.emit(i)

assert L == LL
s.default_client().shutdown()


@pytest.mark.parametrize("backend", test_params)
@gen_test()
def test_filter_combine_latest_triple(backend):
source = Stream(asynchronous=True)

s = scatter(source, backend=backend)
futures = s.filter(lambda x: x % 3 == 1).combine_latest(s)
L = futures.gather().sink_to_list()

presents = source.filter(lambda x: x % 3 == 1).combine_latest(source)

LL = presents.sink_to_list()

for i in range(10):
yield source.emit(i)

assert L == LL
s.default_client().shutdown()


@pytest.mark.parametrize("backend", test_params)
@gen_test()
def test_unique(backend):
source = Stream(asynchronous=True)

s = scatter(source, backend=backend)
futures = s.unique()
L = futures.gather().sink_to_list()

presents = source.unique()

LL = presents.sink_to_list()

for i in range(10):
if i % 2 == 1:
i = i - 1
yield source.emit(i)

assert L == LL
s.default_client().shutdown()
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