VaxLLM (Vaccine Large Language Model) is a pipeline to systematically perform the classification and annotation of Brucella vaccine articles. The VaxLLM annotation involves extracting the itemized information of vaccine antigen, vaccine formulation, host species used as animal model, and experiment performed to investigate the vaccine.
Sample code to use VaxLLM: use_VaxLLM
Sample data provided: 148_final_brucellosis_vaccine_papers.txt
Sample code to clean VaxLLM results: clean_result.ipynb
Sample output: output_vaccine_data_VaxLLM.xlsx