This repository accompanies the paper Matlock W, Lipworth S, Constantinides B, Peto TEA, Walker AS, Crook D, Hopkins S, Shaw LP, Stoesser N. Flanker: a tool for comparative genomics of gene flanking regions. Microbial Genomics. 2021. doi: https://doi.org/10.1099/mgen.0.000634
You can reproduce the analysis performed in our manuscript and the figures in the Binder environment below (click on the Binder badge, N.B. it is a bit slow to load - once the environment is loaded open the flanker.rmd file).
Flanker is available under the MIT License.
