Skip to content

weslleyspereira/tlapack

BranchesTags
 
 

Repository files navigation

<T>LAPACK

C++ Template Linear Algebra PACKage

License Continuous Testing Doxygen ClangFormat CodeQL OpenSSF Scorecard OpenSSF Best Practices

About

First things to know about <T>LAPACK:

  1. We write   <T>LAPACK   whenever it is possible. This includes all software documentation, discussions, and presentation.
  2. We say it   T-L-A-PACK   .
  3. We use   tlapack   for files, folders, and links, to make it more portable and easier to use.

<T>LAPACK provides:

  • Precision-neutral function template implementation

Supported in part by NSF ACI 2004850.

Current functionality

<T>LAPACK is a work in progress (WIP) project. This is a list of the current functionality:

  • BLAS
    • Level 1, except SDSDOT.
    • Level 2, except the routines for banded and packed formats (xGBMV, xHBMV, xHPMV, xSBMV, xSPMV, xTBMV, xTPMV, xTBSV, xTPSV, xHPR, xHPR2, xSPR, xSPR2).
    • Level 3.
  • Linear solvers
    • Safe scaling triangular solve
    • Safe scaling solver for Sylvester equations
  • Matrix factorizations
    • Cholesky
      • Recursive
      • Blocked
    • Fully pivoted QR
    • Fully pivoted RQ
    • Fully pivoted LQ
    • Fully pivoted QL
    • Hessenberg reduction
      • Level-2
      • Blocked
    • Householder QR
      • Level-2
      • Blocked
    • Householder RQ
      • Level-2
      • Blocked
    • Householder LQ
      • Level-2
      • Blocked
    • Householder QL
      • Level-2
      • Blocked
    • Householder bidiagonalization
      • Level-2
      • Blocked
    • LU with partial pivoting
      • Level-0
      • Recursive
  • Matrix inversion
    • General matrix
      • Method C from §14.3.3 in [1]
      • Method D from §14.3.4 in [1]
    • Hermitian positive definite
    • Triangular matrix
      • Recursive
  • Norms of general, hermitian, symmetric and triangular matrices
    • 1-norm
    • Infinity-norm
    • Frobenius-norm
    • Max-norm
  • Nonsymmetric Eigenvalue Problem
    • Schur decomposition
      • Double-shift implicit QR
      • Multishift implicit QR with Aggressive Early Deflation (AED)
    • Eigenvector computation
    • Swap eigenvalues in Schur form
    • Generalized Schur problem
    • Generalized eigenvalue problem
  • Symmetric Eigenvalue Problem
    • Tridiagonal reduction
    • Eigenvector computation
  • Singular Value Decomposition (SVD)
    • Standard singular value problem
    • Generalized singular value problem
  • Linear least squares
    • Using QR factorization
    • Using SVD
  • Additional kernels
    • Order 1 and 2 Sylvester equation solver
    • In-place upper times lower triangular matrix multiplication for general and hermitian matrices
    • In-place lower times upper triangular matrix multiplication
    • In-place transpose of a matrix

The complete documentation and implementation for the routines that are available are listed in the API documentation.

Installation

<T>LAPACK is built and installed with CMake.

Getting CMake

You can either download binaries for the latest stable or previous release of CMake, or build the current development distribution from source. CMake is also available in the APT repository on Ubuntu 16.04 or higher.

Building and Installing <T>LAPACK

<T>LAPACK can be build following the standard CMake recipe

cmake -B build .      # configuration step
cmake --build build   # build step

To install <T>LAPACK in your system, use

cmake -B build -D CMAKE_INSTALL_PREFIX=/path/to/install . # configuration step
cmake --build build --target install                      # install step

CMake options

Standard environment variables affect CMake. Some examples are

CXX                 C++ compiler
CXXFLAGS            C++ compiler flags
LDFLAGS             linker flags

The Fortran and C wrappers to <T>LAPACK also use, among others,

CC                  C compiler
CFLAGS              C compiler flags
FC                  Fortran compiler
FFLAGS              Fortran compiler flags
  • This page lists the environment variables that have special meaning to CMake.

It is also possible to pass variables to CMake during the configuration step using the -D flag. The following example builds <T>LAPACK in debug mode inside the directory build

mkdir build
cmake -B build -DCMAKE_BUILD_TYPE=Debug .
cmake --build build
  • This page documents variables that are provided by CMake or have meaning to CMake when set by project code.

<T>LAPACK options

Here are the <T>LAPACK specific options and their default values

# Option                            # Default

BUILD_BLASPP_TESTS                  OFF

    Use BLAS++ tests to test <T>LAPACK templates.
    REQUIRES: BUILD_TESTING=ON

BUILD_EXAMPLES                      ON

    Build examples

BUILD_LAPACKPP_TESTS                OFF

    Use LAPACK++ tests to test <T>LAPACK templates.
    REQUIRES: BUILD_TESTING=ON

BUILD_STANDALONE_TESTS              OFF

    Build tests as standalone executables in addition to tests for CTest.
    The executables are installed in the test directory.
    The executables do not use Catch2.
    REQUIRES: BUILD_TESTING=ON

BUILD_testBLAS_TESTS                ON

    Build testBLAS tests.
    REQUIRES: BUILD_TESTING=ON

BUILD_TESTING                       ON

    Build the testing tree

BUILD_C_WRAPPERS                          OFF

    Build and install C wrappers (Work In Progress)

BUILD_CBLAS_WRAPPERS                      OFF

    Build and install CBLAS wrappers (Work In Progress)

BUILD_Fortran_WRAPPERS                    OFF

    Build and install Fortran wrappers (Work In Progress)

TLAPACK_CHECK_INPUT                 ON

    Enable checks on input arguments.
    REQUIRES: TLAPACK_NDEBUG=OFF

TLAPACK_DEFAULT_INFCHECK            ON

    Default behavior of checks for Infs. Checks can be activated/deactivated at runtime.
    REQUIRES: TLAPACK_NDEBUG=OFF
              TLAPACK_ENABLE_INFCHECK=ON

TLAPACK_DEFAULT_NANCHECK            ON

    Default behavior of checks for NaNs. Checks can be activated/deactivated at runtime.
    REQUIRES: TLAPACK_NDEBUG=OFF
              TLAPACK_ENABLE_NANCHECK=ON

TLAPACK_ENABLE_INFCHECK             OFF

    Enable check for Infs as specified in the documentation of each routine.
    REQUIRES: TLAPACK_NDEBUG=OFF

TLAPACK_ENABLE_NANCHECK             OFF

    Enable check for NaNs as specified in the documentation of each routine.
    REQUIRES: TLAPACK_NDEBUG=OFF

TLAPACK_INT_T                       int64_t

    Type of all non size-related integers in libtlapack_c, libtlapack_cblas, libtlapack_fortran, and in the routines of the legacy API. It is the type
    used for the array increments, e.g., incx and incy.
    Supported types:
        int, short, long, long long, int8_t, int16_t,
        int32_t, int64_t, int_least8_t, int_least16_t,
        int_least32_t, int_least64_t, int_fast8_t,
        int_fast16_t, int_fast32_t, int_fast64_t,
        intmax_t, intptr_t, ptrdiff_t
    NOTE: TLAPACK_INT_T=int64_t if TLAPACK_USE_LAPACKPP=ON

TLAPACK_NDEBUG                      OFF

    Disable all error checks.

TLAPACK_SIZE_T                      size_t

    Type of all size-related integers in libtlapack_c, libtlapack_cblas, libtlapack_fortran, and in the routines of the legacy API.
    Supported types:
        int, short, long, long long, int8_t, int16_t,
        int32_t, int64_t, int_least8_t, int_least16_t,
        int_least32_t, int_least64_t, int_fast8_t,
        int_fast16_t, int_fast32_t, int_fast64_t,
        intmax_t, intptr_t, ptrdiff_t,
        size_t, uint8_t, uint16_t, uint32_t, uint64_t
    NOTE: TLAPACK_SIZE_T=int64_t if TLAPACK_USE_LAPACKPP=ON

TLAPACK_USE_LAPACKPP               OFF

    Use LAPACK++ wrappers to link with optimized BLAS and LAPACK libraries.
    Mind that LAPACK++ needs BLAS++.
    Branches compatible with <T>LAPACK:
        https://bitbucket.org/weslleyspereira/blaspp/branch/tlapack
        https://bitbucket.org/weslleyspereira/lapackpp/branch/tlapack

Dependencies on other projects

<T>LAPACK currently depends on the following projects:

Project Version When
CMake >= v3.14 Always
ClangFormat 10 Always
Catch2 >= 3.0.1 BUILD_TESTING=ON
Git - BUILD_BLASPP_TESTS=ON OR BUILD_LAPACKPP_TESTS=ON
github.com/icl-utk-edu/testsweeper >= 2021.04.00 BUILD_BLASPP_TESTS=ON OR BUILD_LAPACKPP_TESTS=ON
LAPACK >= 3.9.0 BUILD_BLASPP_TESTS=ON OR BUILD_LAPACKPP_TESTS=ON
ICL BLAS++ test suite 2023.06.00 BUILD_BLASPP_TESTS=ON
ICL LAPACK++ test suite 2022.07.00 BUILD_LAPACKPP_TESTS=ON
LAPACKE >= 3.9.0 BUILD_LAPACKPP_TESTS=ON
github.com/tlapack/testBLAS Latest BUILD_testBLAS_TESTS=ON

Note that:

  • The CMake build system is prepared to download Catch2 and testsweeper whenever they are not available in the system.
  • ICL BLAS++ and LAPACK++ test suites and testBLAS are Git submodules of <T>LAPACK. The are downloaded and built when the corresponding options are set to ON.

<T>LAPACK may also use the following projects when available:

Project Version tested When
ICL BLAS++ 2023.06.00 TLAPACK_USE_LAPACKPP=ON
ICL LAPACK++ 2023.06.00 TLAPACK_USE_LAPACKPP=ON
kokkos mdspan 0.4.0 TLAPACK_TEST_MDSPAN=ON or in some examples
Eigen commit: 2873916f TLAPACK_TEST_EIGEN=ON or in some examples
GNU MPFR C++ Latest in APT TLAPACK_TEST_MPFR=ON or in some examples
GNU libquad Latest in APT TLAPACK_TEST_QUAD=ON
StarPU 1.4.1 Running StarPU examples

We also continuously test <T>LAPACK with optimized BLAS and LAPACK implementations: OpenBLAS, Intel MKL, Flame BLIS, LAPACK, Netlib BLAS.

Note

<T>LAPACK supports Eigen v3.4.0 after applying the patch 9210e71f. This commit fixes an ADL conflict between Eigen::internal::size() and std::size().

Documentation

The documentation of <T>LAPACK is generated using Doxygen. The documentation is available online at https://tlapack.github.io/tlapack. Alternatively, you can generate the documentation in your local machine. To do so, follow the steps below:

  • Install Doxygen in your local machine. See the Doxygen installation page for more details.

  • In the top directory of <T>LAPACK, run doxygen docs/Doxyfile to generate the <T>LAPACK documentation via Doxygen in your local machine.

Additional information about the software can be found in the Wiki pages of the project.

Contributing

Please read CONTRIBUTING.md for details on how to contribute to <T>LAPACK.

Testing

<T>LAPACK is continuously tested on Ubuntu, MacOS and Windows using GNU compilers. See the latest test results in the Github Actions webpage for <T>LAPACK. The tests split into three categories:

  • Test routines in test/src using

    1. various precision types: float, double, std::complex<float>, std::complex<double> and Eigen::half.

    2. various matrix and vector data structures: tlapack::LegacyMatrix, Eigen::Matrix and std::experimental::mdspan (the latter from https://github.com/kokkos/mdspan).

  • Tests from testBLAS for good conformance with BLAS standards.

  • BLAS++ testers and LAPACK++ testers for measuring performance and accuracy compared to LAPACKE.

To test <T>LAPACK, build with BUILD_TESTING=ON. Then, run ctest inside the build directory.

License

BSD 3-Clause License

Copyright (c) 2021-2023, University of Colorado Denver. All rights reserved.

Copyright (c) 2017-2021, University of Tennessee. All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

  1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.

  2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.

  3. Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

References

[1] Higham, N. J. (2002). Accuracy and stability of numerical algorithms. Society for industrial and applied mathematics.

About

C++ Template Linear Algebra PACKage

Resources

Readme

License

BSD-3-Clause license

Security policy

Security policy
Activity

Stars

2 stars

Watchers

1 watching

Forks

0 forks
Report repository

Releases

No releases published

Packages

No packages published

Languages

  • C++ 72.8%
  • C 22.7%
  • CMake 2.4%
  • Python 2.0%
  • Fortran 0.1%