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@wanglab-broad

Wang Lab @ MIT and Broad Institute

README.md

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Pinned

  1. ClusterMap ClusterMap Public

    ClusterMap for multi-scale clustering analysis of spatial gene expression

    Jupyter Notebook 39 11

  2. spin spin Public

    SPatial INtegration of spatially resolved transcriptomics datasets

    Python 13

  3. CAST CAST Public

    CAST package

    Python 8 1

  4. FuseMap FuseMap Public

    FuseMap: Integrate spatial transcripomics with universal gene, cell, and tissue embeddings.

    Jupyter Notebook 2

  5. starfinder starfinder Public

    Customized snakemake workflow for computational image processing

    Jupyter Notebook 1

  6. harmonics harmonics Public

    Harmonic analysis of spatial transcriptomics data

    Python

Repositories

Showing 10 of 15 repositories
  • starfinder Public

    Customized snakemake workflow for computational image processing

    wanglab-broad/starfinder’s past year of commit activity
    Jupyter Notebook 1 MIT 0 1 0 Updated Aug 21, 2024
  • harmonics Public

    Harmonic analysis of spatial transcriptomics data

    wanglab-broad/harmonics’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 19, 2024
  • ClusterMap Public

    ClusterMap for multi-scale clustering analysis of spatial gene expression

    wanglab-broad/ClusterMap’s past year of commit activity
    Jupyter Notebook 39 GPL-3.0 11 5 0 Updated Jul 20, 2024
  • Multicap-analysis Public
    wanglab-broad/Multicap-analysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 24, 2024
  • .github Public

    Organization profile

    wanglab-broad/.github’s past year of commit activity
    0 0 0 0 Updated Jun 20, 2024
  • FuseMap Public

    FuseMap: Integrate spatial transcripomics with universal gene, cell, and tissue embeddings.

    wanglab-broad/FuseMap’s past year of commit activity
    Jupyter Notebook 2 Apache-2.0 0 0 0 Updated Jun 2, 2024
  • spin Public

    SPatial INtegration of spatially resolved transcriptomics datasets

    wanglab-broad/spin’s past year of commit activity
    Python 13 GPL-3.0 0 1 0 Updated May 1, 2024
  • mCNS-atlas Public
    wanglab-broad/mCNS-atlas’s past year of commit activity
    Jupyter Notebook 17 4 3 0 Updated Mar 31, 2024
  • CAST Public

    CAST package

    wanglab-broad/CAST’s past year of commit activity
    Python 8 MIT 1 0 0 Updated Mar 28, 2024
  • RIBOmap-analysis Public
    wanglab-broad/RIBOmap-analysis’s past year of commit activity
    Jupyter Notebook 3 1 0 0 Updated Nov 14, 2023
View all repositories

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