Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

fix: remove path to hgnc_xlink.tsv from Docker entrypoint #176

Merged
merged 1 commit into from
Jul 11, 2024
Merged

fix: remove path to hgnc_xlink.tsv from Docker entrypoint #176

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 0 additions & 4 deletions utils/docker/entrypoint.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,15 +7,12 @@ set -euo pipefail
#
# PATH_HPO_DIR -- path to the directory with HPO files
# default: /data/hpo
# PATH_HGNC_XLINK -- path to the TSV xlink file
# default: /data/hgnc_xlink.tsv
# HTTP_HOST -- host to listen on
# default: 0.0.0.0
# HTTP_PORT -- port
# default: 8080

PATH_HPO_DIR=${PATH_HPO_DIR-/data/hpo}
PATH_HGNC_XLINK=${PATH_HGNC_XLINK-/data/hgnc_xlink.tsv}
HTTP_HOST=${HTTP_HOST-0.0.0.0}
HTTP_PORT=${HTTP_PORT-8080}

Expand All @@ -28,7 +25,6 @@ else
exec \
viguno server run \
--path-hpo-dir "$PATH_HPO_DIR" \
--path-hgnc-xlink "$PATH_HGNC_XLINK" \
--listen-host "$HTTP_HOST" \
--listen-port "$HTTP_PORT"
fi
Expand Down
Loading