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fix: display of variant annotation counts are static always (#1376) #1437

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stolpeo
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@stolpeo stolpeo commented Mar 15, 2024

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@stolpeo stolpeo linked an issue Mar 15, 2024 that may be closed by this pull request
@stolpeo stolpeo enabled auto-merge (squash) March 15, 2024 09:28
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deps-report 🔍

Commit scanned: 4c02f60
ℹ️ Python version 3.10 is used by your project but the latest version is 3.12.

Vulnerable dependencies

2 dependencies have vulnerabilities 😱
Dependency Advisory Versions impacted
pyopenssl (transitive) CVE-2023-6129 affects PyOpenSSL versions starting from 22.0.0 due to a vulnerability in the POLY1305 MAC algorithm on PowerPC CPUs. This issue could lead to state corruption in applications, causing inaccurate outcomes or service disruptions. Attackers need specific conditions to exploit this flaw, including the ability to manipulate the algorithm's use and reliance on certain system registers by the application. >=22.0.0
sqlalchemy Sqlalchemy 2.0.0b1 avoids leaking cleartext passwords to the open for careless uses of str(engine.URL()) in logs and prints. sqlalchemy/sqlalchemy#8563 <2.0.0b1

Outdated dependencies

46 outdated dependencies found (including 17 outdated major versions)😢
Dependency Installed version Latest version
argon2-cffi (transitive) 21.3.0 23.1.0
billiard (transitive) 3.6.4.0 4.2.0
coverage (dev,transitive) 6.5.0 7.4.4
crispy-bootstrap4 (transitive) 2022.1 2024.1
django 3.2.24 5.0.3
faker (dev,transitive) 23.3.0 24.2.0
flake8 (dev) 6.1.0 7.0.0
lxml 4.9.4 5.1.0
mistune (transitive) 2.0.5 3.0.2
packaging (transitive) 23.2 24.0
protobuf 3.20.3 5.26.0
setuptools (transitive) 67.6.1 69.2.0
sphinx (transitive) 6.2.1 7.2.6
sphinx-rtd-theme (transitive) 1.2.2 2.0.0
sqlalchemy 1.4.51 2.0.28
unidecode (transitive) 0.4.21 1.3.8
xmlschema (transitive) 2.5.1 3.1.0
Dependency Installed version Latest version
aiobotocore (transitive) 2.12.0 2.12.1
botocore (transitive) 1.34.51 1.34.63
celery (transitive) 5.2.7 5.3.6
django-autocomplete-light (transitive) 3.9.4 3.11.0
django-crispy-forms (transitive) 2.0 2.1
django-db-file-storage (transitive) 0.5.5 0.5.6.1
django-environ (transitive) 0.10.0 0.11.2
django-iconify (transitive) 0.1.1 0.4
django-model-utils (transitive) 4.3.1 4.4.0
django-plugins-bihealth 0.4.0 0.5.2
django-postgres-copy 2.3.7 2.7.4
docutils (transitive) 0.18.1 0.20.1
drf-keyed-list-bihealth 0.1.1 0.2.1
drf-spectacular-sidecar (transitive) 2024.2.1 2024.3.4
elementpath (transitive) 4.3.0 4.4.0
ipython (dev,transitive) 8.22.1 8.22.2
markdown (transitive) 3.4.1 3.6
pydantic 2.6.3 2.6.4
pyflakes (dev,transitive) 3.1.0 3.2.0
pyopenssl (transitive) 24.0.0 24.1.0
python-dateutil 2.9.0 2.9.0.post0
redis 5.0.2 5.0.3
requests-http-signature 0.2.0 0.7.1
sentry-sdk 1.40.6 1.42.0
traitlets (dev,transitive) 5.14.1 5.14.2
universal-pathlib 0.2.1 0.2.2
urllib3 (transitive) 2.0.7 2.2.1
versioneer (transitive) 0.28 0.29
wheel (transitive) 0.40.0 0.43.0

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codecov bot commented Mar 15, 2024

Codecov Report

Attention: Patch coverage is 78.94737% with 4 lines in your changes are missing coverage. Please review.

Project coverage is 70%. Comparing base (2903065) to head (4c02f60).

Additional details and impacted files
@@          Coverage Diff          @@
##            main   #1437   +/-   ##
=====================================
  Coverage     70%     70%           
=====================================
  Files        381     381           
  Lines      24734   24743    +9     
  Branches    1597    1600    +3     
=====================================
+ Hits       17393   17476   +83     
+ Misses      7341    7267   -74     
Files Coverage Δ
...eapp/src/components/CaseDetail/CardAnnotations.vue 88% <92%> (+1%) ⬆️
cases/vueapp/src/components/CaseDetail/Content.vue 78% <50%> (-15%) ⬇️

... and 6 files with indirect coverage changes

@stolpeo stolpeo merged commit dbfd897 into main Mar 15, 2024
17 checks passed
@stolpeo stolpeo deleted the 1376-display-of-variant-flagscommentsacmg-counts-are-static-always-0 branch March 15, 2024 09:37
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Display of variant flags/comments/acmg counts are static / always 0
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