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feat: implement "seqvars ingest" command (#199)

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GitHub Actions / clippy succeeded Oct 5, 2023 in 0s

clippy

3 warnings

Details

Results

Message level Amount
Internal compiler error 0
Error 0
Warning 3
Note 0
Help 0

Versions

  • rustc 1.72.1 (d5c2e9c34 2023-09-13)
  • cargo 1.72.1 (103a7ff2e 2023-08-15)
  • clippy 0.1.72 (d5c2e9c 2023-09-13)

Annotations

Check warning on line 36 in src/seqvars/ingest/mod.rs

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@github-actions github-actions / clippy

use of `default` to create a unit struct

warning: use of `default` to create a unit struct
  --> src/seqvars/ingest/mod.rs:36:29
   |
36 |         vcf::reader::Builder::default()
   |                             ^^^^^^^^^^^ help: remove this call to `default`
   |
   = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#default_constructed_unit_structs
   = note: `#[warn(clippy::default_constructed_unit_structs)]` on by default

Check warning on line 49 in src/seqvars/ingest/header.rs

See this annotation in the file changed.

@github-actions github-actions / clippy

unused variable: `genomebuild`

warning: unused variable: `genomebuild`
  --> src/seqvars/ingest/header.rs:49:5
   |
49 |     genomebuild: GenomeRelease,
   |     ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_genomebuild`

Check warning on line 51 in src/seqvars/ingest/header.rs

See this annotation in the file changed.

@github-actions github-actions / clippy

unused variable: `variant_caller`

warning: unused variable: `variant_caller`
  --> src/seqvars/ingest/header.rs:51:9
   |
51 |     let variant_caller = VariantCaller::guess(input_header)
   |         ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_variant_caller`
   |
   = note: `#[warn(unused_variables)]` on by default