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Sanity check for GRCh37 gnomad genomes and chromosome "Y" is wrong #56

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holtgrewe opened this issue Jul 22, 2022 · 0 comments · Fixed by #57
Closed

Sanity check for GRCh37 gnomad genomes and chromosome "Y" is wrong #56

holtgrewe opened this issue Jul 22, 2022 · 0 comments · Fixed by #57

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@holtgrewe
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This must check chromosome name and not release.

https://github.com/bihealth/varfish-annotator/blob/46ed1a6cc4e94866a65451a3b3cbe2863ff5964a/varfish-annotator-cli/src/main/java/com/github/bihealth/varfish_annotator/utils/DatabaseSelfTest.java#L58
holtgrewe added a commit that referenced this issue Jul 22, 2022
@holtgrewe
Fixing unresolved issue with self-test (#51, #56)
f86329c 
Related-Issue: #51, #56
Closes: #56
Projected-Results-Impact: none
@holtgrewe holtgrewe mentioned this issue Jul 22, 2022
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@holtgrewe holtgrewe linked a pull request Jul 22, 2022 that will close this issue
Fixing unresolved issue with self-test (#51, #56) #57
Merged
@holtgrewe holtgrewe mentioned this issue Jul 22, 2022
Closed
holtgrewe added a commit that referenced this issue Jul 22, 2022
@holtgrewe
Fixing unresolved issue with self-test (#51, #56)
8b1ec08 
Related-Issue: #51
Related-Issue: #56
Closes: #56
Projected-Results-Impact: none
holtgrewe added a commit that referenced this issue Jul 22, 2022
@holtgrewe
Fixing unresolved issue with self-test (#51, #56)
06699da 
Related-Issue: #51
Related-Issue: #56
Closes: #56
Projected-Results-Impact: none
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Fixing unresolved issue with self-test (#51, #56) varfish-org/varfish-annotator
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@holtgrewe