Optuna hyperparameter optimization tutorial#178

Merged

robsdavis merged 115 commits intovanderschaarlab:mainfrom tztsai:optuna_tutorial

Apr 25, 2023

+440-83

Commits on Mar 1, 2023

first commit for the addition of the TabDDPM plugin
TZCai
committed

Commits on Mar 3, 2023

Add DDPM test script and update DDPM plugin
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Commits on Mar 5, 2023

add TabDDPM class and refactor
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Commits on Mar 7, 2023

Commits on Mar 8, 2023

passed all pre-commit checks
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convert assert to conditional AssertionErrors
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Commits on Mar 10, 2023

added an auto annotation tool
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update auto-anno and generate annotations
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remove auto-anno and flake8 noqa
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add python<3.9 compatible annotations
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remove star import
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Commits on Mar 12, 2023

replace builtin type annos to typing annos
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resolve py38 compatibility issue
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tests/plugins/generic/test_ddpm.py
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Commits on Mar 13, 2023

change TabDDPM method signatures
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remove Iterator subscription
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Commits on Mar 15, 2023

Commits on Mar 16, 2023

remove TensorDataLoader, update test_ddpm
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update EarlyStopping
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Commits on Mar 27, 2023

add TabDDPM tutorial, update TabDDPM plugin and encoders
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add TabDDPM tutorial
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Commits on Mar 30, 2023

Commits on Mar 31, 2023

debug LogDistribution and LogIntDistribution
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Merge branch 'main' into tab_ddpm
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Commits on Apr 1, 2023

change discrete encoding of BinEncoder to passthrough; passed all tests in test_tabular_encoder
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Commits on Apr 2, 2023

add tabnet to plugins/core/models
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add factory.py, let DDPM use TabNet, refactor
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update docstrings and refactor
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fix type annotation compatibility
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Commits on Apr 3, 2023

make SkipConnection serializable
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fix TabularEncoder.activation_layout
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remove unnecessary code
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Commits on Apr 6, 2023

Commits on Apr 7, 2023

replace LabelEncoder with OrdinalEncoder
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update setup.cfg
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update setup.cfg
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debug datetimeDistribution
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Merge branch 'tab_ddpm' into tabnet
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clean
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update setup.cfg and goggle test
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Merge branch 'tab_ddpm' into tabnet
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move DDPM tutorial to tutorials/plugins
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update tabnet.py reference
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update tab_ddpm
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Commits on Apr 8, 2023

update distribution, add optuna utils and tutorial
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update
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Fix plugin type of static_model of fflows
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update intlogdistribution and tutorial
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try fixing goggle
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add more activations
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minor fix
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Commits on Apr 9, 2023

update
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Merge branch 'tab_ddpm' into tabnet
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update
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update
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update
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Commits on Apr 10, 2023

Update tabular_encoder.py
Tianzhang Cai
authored
Update test_goggle.py
Tianzhang Cai
authored
Update tabular_encoder.py
Tianzhang Cai
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update
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update tutorial 8
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update
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default cat nonlin of goggle <- gumbel_softmax
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get_nonlin('softmax') <- GumbelSoftmax()
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remove debug logging
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update
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Merge branch 'tab_ddpm' into tabnet
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update
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Commits on Apr 16, 2023

Merge branch 'main' into optuna_tutorial
Tianzhang Cai
authored

Commits on Apr 18, 2023

Merge branch 'main' into tabnet
robsdavis
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fix merge
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fix merge
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Commits on Apr 19, 2023

update pip upgrade commands in workflows
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update pip upgrade commands in workflows
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keep pip version to 23.0.1 in workflows
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keep pip version to 23.0.1 in workflows
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Commits on Apr 20, 2023

Merge branch 'tabnet' into optuna_tutorial
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update
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Merge branch 'main' into optuna_tutorial
Tianzhang Cai
authored
update
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committed
update
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update
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update
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update
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fix distribution
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Merge branch 'main' into tabnet
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Merge branch 'tabnet' into optuna_tutorial
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resolve merge conflicts
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Merge branch 'tab_ddpm' into optuna_tutorial
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update
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Commits on Apr 24, 2023

move upgrading of wheel to prereq.txt
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update
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