Code

Add Tabnet support#168

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robsdavis merged 91 commits intovanderschaarlab:mainvanderschaarlab/synthcity:mainfrom tztsai:tabnettztsai/synthcity:tabnetCopy head branch name to clipboardApr 20, 2023

+10-5

Commits

Commits on Mar 1, 2023

• first commit for the addition of the TabDDPM plugin

  

  TZCai

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Commits on Mar 3, 2023

• Add DDPM test script and update DDPM plugin

  

  TZCai

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Commits on Mar 5, 2023

• add TabDDPM class and refactor

  

  TZCai

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Commits on Mar 7, 2023

• handle discrete cols and label generation

  

  TZCai

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• add hparam space and update tests of DDPM

  

  TZCai

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• debug and test DDPM

  

  TZCai

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• update TensorDataLoader and training loop

  

  TZCai

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• clear bugs

  

  TZCai

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• debug for regression tasks

  

  TZCai

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• debug for regression tasks; ALL TESTS PASSED

  

  TZCai

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• Merge branch 'tab_ddpm' of https://github.com/TZTsai/synthcity into tab_ddpm

  

  TZCai

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• remove the official repo of TabDDPM

  

  TZCai

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Commits on Mar 8, 2023

• passed all pre-commit checks

  

  TZCai

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• convert assert to conditional AssertionErrors

  

  TZCai

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Commits on Mar 10, 2023

• added an auto annotation tool

  

  TZCai

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• update auto-anno and generate annotations

  

  TZCai

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• remove auto-anno and flake8 noqa

  

  TZCai

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• add python<3.9 compatible annotations

  

  TZCai

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• remove star import

  

  TZCai

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Commits on Mar 12, 2023

• replace builtin type annos to typing annos

  

  TZCai

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• resolve py38 compatibility issue

  

  TZCai

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• tests/plugins/generic/test_ddpm.py

  

  TZCai

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Commits on Mar 13, 2023

• change TabDDPM method signatures

  

  TZCai

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• remove Iterator subscription

  

  TZCai

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Commits on Mar 15, 2023

• update AssertionErrors, add EarlyStop callback, removed additional MLP, update logging

  

  TZCai

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• Merge branch 'main' into tab_ddpm

  bcebere

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Commits on Mar 16, 2023

• remove TensorDataLoader, update test_ddpm

  

  TZCai

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• update EarlyStopping

  

  TZCai

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Commits on Mar 27, 2023

• add TabDDPM tutorial, update TabDDPM plugin and encoders

  

  TZCai

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• add TabDDPM tutorial

  

  TZCai

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Commits on Mar 30, 2023

• major update of FeatureEncoder and TabularEncoder

  

  TZCai

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• add LogDistribution and LogIntDistribution

  

  TZCai

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• update DDPM to use TabularEncoder

  

  TZCai

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• update test_tabular_encoder and debug

  

  TZCai

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• debug and DDPM tutorial OK

  

  TZCai

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• Merge branch 'main' of https://github.com/vanderschaarlab/synthcity

  

  TZCai

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• Merge branch 'main' into tab_ddpm

  

  TZCai

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Commits on Mar 31, 2023

• debug LogDistribution and LogIntDistribution

  

  TZCai

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• Merge branch 'main' into tab_ddpm

  

  TZCai

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Commits on Apr 1, 2023

• change discrete encoding of BinEncoder to passthrough; passed all tests in test_tabular_encoder

  

  TZCai

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Commits on Apr 2, 2023

• add tabnet to plugins/core/models

  

  TZCai

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• add factory.py, let DDPM use TabNet, refactor

  

  TZCai

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• update docstrings and refactor

  

  TZCai

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  6e58cf3

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• fix type annotation compatibility

  

  TZCai

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Commits on Apr 3, 2023

• make SkipConnection serializable

  

  TZCai

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• fix TabularEncoder.activation_layout

  

  TZCai

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• remove unnecessary code

  

  TZCai

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Commits on Apr 6, 2023

• fix minor bug and add more nn models in factory

  

  TZCai

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• update pandas and torch version requirement

  

  TZCai

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• update pandas and torch version requirement

  

  TZCai

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• Merge branch 'main' into tabnet

  

  Eva Lu Ator

  authored
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• Merge branch 'main' into tab_ddpm

  

  Eva Lu Ator

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• update ddpm tutorial

  

  TZCai

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• Merge branch 'tab_ddpm' of https://github.com/TZTsai/synthcity into tab_ddpm

  

  TZCai

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• restore setup.cfg

  

  TZCai

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• restore setup.cfg

  

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Commits on Apr 7, 2023

• replace LabelEncoder with OrdinalEncoder

  

  TZCai

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• update setup.cfg

  

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• update setup.cfg

  

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• debug datetimeDistribution

  

  TZCai

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• Merge branch 'tab_ddpm' into tabnet

  

  TZCai

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• clean

  

  TZCai

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• update setup.cfg and goggle test

  

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• Merge branch 'tab_ddpm' into tabnet

  

  TZCai

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• move DDPM tutorial to tutorials/plugins

  

  TZCai

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• update tabnet.py reference

  

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• update tab_ddpm

  

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Commits on Apr 8, 2023

• update

  

  TZCai

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• try fixing goggle

  

  TZCai

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• add more activations

  

  TZCai

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• minor fix

  

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Commits on Apr 9, 2023

• update

  

  TZCai

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• Merge branch 'tab_ddpm' into tabnet

  

  TZCai

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• update

  

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• update

  

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• update

  

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Commits on Apr 10, 2023

• Update tabular_encoder.py

  

  Tianzhang Cai

  authored
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• Update test_goggle.py

  

  Tianzhang Cai

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• Update tabular_encoder.py

  

  Tianzhang Cai

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• update

  

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• update

  

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• default cat nonlin of goggle <- gumbel_softmax

  

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• get_nonlin('softmax') <- GumbelSoftmax()

  

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• remove debug logging

  

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• update

  

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• Merge branch 'tab_ddpm' into tabnet

  

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• update

  

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Commits on Apr 18, 2023

• Merge branch 'main' into tabnet

  robsdavis

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• fix merge

  

  TZCai

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Commits on Apr 19, 2023

• update pip upgrade commands in workflows

  

  TZCai

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• keep pip version to 23.0.1 in workflows

  

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