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Update module files for Cheyenne to use hpc-stack, final GFS v16 updates in CCPP, revert ccpp_prebuild.py call changee #238

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climbfuji wants to merge 9 commits into from
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Update module files for Cheyenne to use hpc-stack, final GFS v16 updates in CCPP, revert ccpp_prebuild.py call changee #238

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cde9696
Update .gitmodules and submodule pointers for NEMS and fv3atm
climbfuji Oct 23, 2020
6d8a80d
Update modulefiles for cheyenne.intel and cheyenne.gnu to use hpc-stack
climbfuji Oct 23, 2020
de1054a
Update submodule pointer for fv3atm
climbfuji Oct 26, 2020
07f6397
Update modulefiles for cheyenne.intel and cheyenne.gnu
climbfuji Oct 26, 2020
e431723
Update submodule pointer for fv3atm
climbfuji Oct 26, 2020
40ae770
Merge branch 'develop' of https://github.com/ufs-community/ufs-weathe…
climbfuji Oct 26, 2020
9115d36
Update submodule pointer for fv3atm
climbfuji Oct 27, 2020
bbd3f31
modulefiles/cheyenne.*/fv3: need to load compilers despite being load…
climbfuji Oct 27, 2020
6e157b5
Update submodule pointer for fv3atm
climbfuji Oct 27, 2020
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12 changes: 8 additions & 4 deletions .gitmodules
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Original file line number Diff line number Diff line change
@@ -1,11 +1,15 @@
[submodule "FV3"]
path = FV3
url = https://github.com/NOAA-EMC/fv3atm
branch = develop
#url = https://github.com/NOAA-EMC/fv3atm
#branch = develop
url = https://github.com/climbfuji/fv3atm
branch = revert-ccpp-prebuild-call
[submodule "NEMS"]
path = NEMS
url = https://github.com/NOAA-EMC/NEMS
branch = develop
#url = https://github.com/NOAA-EMC/NEMS
#branch = develop
url = https://github.com/climbfuji/NEMS
branch = revert-ccpp-prebuild-call
[submodule "FMS"]
path = FMS
url = https://github.com/NOAA-GFDL/FMS
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2 changes: 1 addition & 1 deletion FV3
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Submodule FV3 updated 5 files
+8 −4 .gitmodules
+10 −5 CMakeLists.txt
+1 −1 atmos_cubed_sphere
+117 −117 ccpp/config/ccpp_prebuild_config.py
+1 −1 ccpp/physics
2 changes: 1 addition & 1 deletion NEMS
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Submodule NEMS updated 1 files
+2 −1 doc/prep_inputs.py
77 changes: 32 additions & 45 deletions modulefiles/cheyenne.gnu/fv3
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Original file line number Diff line number Diff line change
@@ -1,60 +1,47 @@
#%Module######################################################################
##
## NEMS FV3 Prerequisites: Cheyenne/GNU
#%Module

proc ModulesHelp {} {
puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Cheyenne/GNU"
puts stderr "\tcit - loads modules required for building and running UFS Model on Cheyenne/GNU"
}

module-whatis "loads NEMS FV3 prerequisites for Cheyenne/GNU"
module-whatis "loads UFS Model prerequisites for Cheyenne/GNU"

# NOTE: the "module purge" and loading of the module command are
# handled by the module-setup.sh (or .csh) script.
module load cmake/3.16.4
setenv CMAKE_C_COMPILER mpicc
setenv CMAKE_CXX_COMPILER mpicxx
setenv CMAKE_Fortran_COMPILER mpif90
setenv CMAKE_Platform cheyenne.gnu

##
## load programming environment
## this typically includes compiler, MPI and job scheduler
##
# load programming environment
module load ncarenv/1.3
# Need to load compilers despite being loaded again below or ncarcompilers will fail
module load gnu/9.1.0
module load mpt/2.19
module load mpt/2.22
module load ncarcompilers/0.5.0
module unload netcdf

module use /glade/p/ral/jntp/GMTB/tools/hpc-stack-20201022/modulefiles/stack
module load hpc/1.0.0-beta1
module load hpc-gnu/9.1.0
module load hpc-mpt/2.22

##
## use pre-compiled PNG, NetCDF, ESMF and NCEP libraries for above compiler / MPI combination
##
module use -a /glade/p/ral/jntp/GMTB/tools/ufs-stack-20200909/gnu-9.1.0/mpt-2.19/modules
module load jasper/2.0.22
module load zlib/1.2.11
module load png/1.6.35
module load jpeg/9.1.0

module load libpng/1.6.35
module load hdf5/1.10.6
module load netcdf/4.7.4
module load esmf/8.1.0bs27
module load pio/2.5.1
module load esmf/8_1_0_beta_snapshot_27

module load bacio/2.4.0
module load bacio/2.4.1
module load crtm/2.3.0
module load g2/3.4.0
module load g2tmpl/1.9.0
module load ip/3.3.0
module load g2/3.4.1
module load g2tmpl/1.9.1
module load ip/3.3.3
module load nceppost/dceca26
module load nemsio/2.5.1
module load sp/2.3.0
module load w3emc/2.7.0
module load w3nco/2.4.0

module load gfsio/1.4.0
module load sfcio/1.4.0
module load sigio/2.3.0

##
## SIONlib library
##
module use -a /glade/p/ral/jntp/GMTB/tools/modulefiles/gnu-9.1.0/mpt-2.19
module load SIONlib/1.7.4

##
## load cmake
##
module load cmake/3.16.4
setenv CMAKE_C_COMPILER mpicc
setenv CMAKE_CXX_COMPILER mpicxx
setenv CMAKE_Fortran_COMPILER mpif90
setenv CMAKE_Platform cheyenne.gnu
module load nemsio/2.5.2
module load sp/2.3.3
module load w3emc/2.7.3
module load w3nco/2.4.1
77 changes: 32 additions & 45 deletions modulefiles/cheyenne.intel/fv3
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Original file line number Diff line number Diff line change
@@ -1,60 +1,47 @@
#%Module######################################################################
##
## NEMS FV3 Prerequisites: Cheyenne/Intel
#%Module

proc ModulesHelp {} {
puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Cheyenne/Intel"
puts stderr "\tcit - loads modules required for building and running UFS Model on Cheyenne/Intel"
}

module-whatis "loads NEMS FV3 prerequisites for Cheyenne/Intel"
module-whatis "loads UFS Model prerequisites for Cheyenne/Intel"

# NOTE: the "module purge" and loading of the module command are
# handled by the module-setup.sh (or .csh) script.
module load cmake/3.16.4
setenv CMAKE_C_COMPILER mpicc
setenv CMAKE_CXX_COMPILER mpicxx
setenv CMAKE_Fortran_COMPILER mpif90
setenv CMAKE_Platform cheyenne.intel

##
## load programming environment
## this typically includes compiler, MPI and job scheduler
##
# load programming environment
module load ncarenv/1.3
# Need to load compilers despite being loaded again below or ncarcompilers will fail
module load intel/19.1.1
module load mpt/2.19
module load mpt/2.22
module load ncarcompilers/0.5.0
module unload netcdf

module use /glade/p/ral/jntp/GMTB/tools/hpc-stack-20201022/modulefiles/stack
module load hpc/1.0.0-beta1
module load hpc-intel/19.1.1
module load hpc-mpt/2.22

##
## use pre-compiled PNG, NetCDF, ESMF and NCEP libraries for above compiler / MPI combination
##
module use -a /glade/p/ral/jntp/GMTB/tools/ufs-stack-20200909/intel-19.1.1/mpt-2.19/modules
module load jasper/2.0.22
module load zlib/1.2.11
module load png/1.6.35
module load jpeg/9.1.0

module load libpng/1.6.35
module load hdf5/1.10.6
module load netcdf/4.7.4
module load esmf/8.1.0bs27
module load pio/2.5.1
module load esmf/8_1_0_beta_snapshot_27

module load bacio/2.4.0
module load bacio/2.4.1
module load crtm/2.3.0
module load g2/3.4.0
module load g2tmpl/1.9.0
module load ip/3.3.0
module load g2/3.4.1
module load g2tmpl/1.9.1
module load ip/3.3.3
module load nceppost/dceca26
module load nemsio/2.5.1
module load sp/2.3.0
module load w3emc/2.7.0
module load w3nco/2.4.0

module load gfsio/1.4.0
module load sfcio/1.4.0
module load sigio/2.3.0

##
## SIONlib library
##
module use -a /glade/p/ral/jntp/GMTB/tools/modulefiles/intel-19.1.1/mpt-2.19
module load SIONlib/1.7.4

##
## load cmake
##
module load cmake/3.16.4
setenv CMAKE_C_COMPILER mpicc
setenv CMAKE_CXX_COMPILER mpicxx
setenv CMAKE_Fortran_COMPILER mpif90
setenv CMAKE_Platform cheyenne.intel
module load nemsio/2.5.2
module load sp/2.3.3
module load w3emc/2.7.3
module load w3nco/2.4.1