[test-do-not-merge] Test PR for python workflow with Jenkins modifications from public/release-v2

.cicd/Jenkinsfile

@@ -135,6 +135,12 @@ pipeline {
                             echo "Testing SRW (${env.SRW_COMPILER}) on ${env.SRW_PLATFORM}"
                             sh 'bash --login "${WORKSPACE}/.cicd/scripts/srw_test.sh"'
                         }
+
+                        post {
+                            always {
+                                s3Upload consoleLogLevel: 'INFO', dontSetBuildResultOnFailure: false, dontWaitForConcurrentBuildCompletion: false, entries: [[bucket: 'woc-epic-jenkins-artifacts', excludedFile: '', flatten: false, gzipFiles: false, keepForever: false, managedArtifacts: true, noUploadOnFailure: true, selectedRegion: 'us-east-1', showDirectlyInBrowser: false, sourceFile: 'test_results-*-*.txt', storageClass: 'STANDARD', uploadFromSlave: false, useServerSideEncryption: false]], pluginFailureResultConstraint: 'FAILURE', profileName: 'main', userMetadata: []
+                            }
+                        }
                     }
                 }
             }

.cicd/scripts/srw_test.sh

@@ -17,5 +17,120 @@ else
     workspace="$(cd -- "${script_dir}/../.." && pwd)"
 fi
 
+we2e_experiment_base_dir="${workspace}/experiments"
+we2e_test_dir="${workspace}/regional_workflow/tests/WE2E"
+
+we2e_test_file="${we2e_test_dir}/experiments.txt"
+
+# The default set of end-to-end tests to run.
+# TODO: Create a list of additional tests that can be run when a parameter
+# is set to true.
+declare -a we2e_default_tests
+we2e_default_tests=('grid_RRFS_CONUS_25km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v16'
+    'grid_RRFS_CONUS_13km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v16'
+    'grid_SUBCONUS_Ind_3km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v16')
+
+# Parses the test log for the status of a specific test.
+function workflow_status() {
+    local test="$1"
+
+    local test_dir="${we2e_experiment_base_dir}/${test}"
+    local log_file="${test_dir}/log.launch_FV3LAM_wflow"
+
+    if [[ -f "${log_file}" ]]; then
+        local status
+        status="$(awk 'BEGIN {FS=":";} $1 ~ "^[[:space:]]+Workflow status" {print $2}' "${log_file}" |\
+            tail -1 |\
+            sed --regexp-extended --expression 's/^[[:space:]]*(.*)[[:space:]]*$/\1/')"
+        if [[ "${status}" == 'IN PROGRESS' || "${status}" == 'SUCCESS' || "${status}" == 'FAILURE' ]]; then
+            echo "${status}"
+        else
+            echo 'UNKNOWN'
+        fi
+    else
+        echo 'NOT FOUND'
+    fi
+}
+
+# Gets the status of all tests. Prints the number of tests that are running.
+# Returns a non-zero code when all tests reach a final state.
+function check_progress() {
+    local in_progress=false
+    local remaining=0
+
+    for test in "${we2e_default_tests[@]}"; do
+        local status
+        status="$(workflow_status "${test}")"
+        if [[ "${status}" == 'IN PROGRESS' ]]; then
+            in_progress=true
+            (( remaining++ ))
+        fi
+    done
+
+    if "${in_progress}"; then
+        echo "Tests remaining: ${remaining}"
+    else
+        return 1
+    fi
+}
+
+# Prints the status of all tests.
+function get_results() {
+    for test in "${we2e_default_tests[@]}"; do
+        local status
+        status="$(workflow_status "${test}")"
+        echo "${test} ${status}"
+    done
+}
+
 # Verify that there is a non-zero sized weather model executable.
 [[ -s "${workspace}/bin/ufs_model" ]] || [[ -s "${workspace}/bin/NEMS.exe" ]]
+
+# Set test related environment variables and load required modules.
+source "${workspace}/etc/lmod-setup.sh" "${SRW_PLATFORM}"
+module use "${workspace}/modulefiles"
+module load "build_${SRW_PLATFORM}_${SRW_COMPILER}"
+module load "wflow_${SRW_PLATFORM}"
+
+if [[ "${SRW_PLATFORM}" == 'cheyenne' ]]; then
+    export PATH="/glade/p/ral/jntp/UFS_CAM/ncar_pylib_20200427/bin:${PATH}"
+else
+    conda activate regional_workflow
+fi
+
+# Create the experiments/tests base directory.
+mkdir "${we2e_experiment_base_dir}"
+
+# Generate the experiments/tests file.
+for test in "${we2e_default_tests[@]}"; do
+    echo "${test}" >> "${we2e_test_file}"
+done
+
+# Run the end-to-end tests.
+"${we2e_test_dir}/run_WE2E_tests.sh" \
+    tests_file="${we2e_test_file}" \
+    machine="${SRW_PLATFORM}" \
+    account="${SRW_PROJECT}" \
+    expt_basedir="${we2e_experiment_base_dir}" \
+    compiler="${SRW_COMPILER}"
+
+# Allow the tests to start before checking for status.
+# TODO: Create a parameter that sets the initial start delay.
+sleep 180
+
+# Wait for all tests to complete.
+while check_progress; do
+    # TODO: Create a paremeter that sets the poll frequency.
+    sleep 60
+done
+
+# Get test results and write to a file.
+results="$(get_results |\
+    tee "${workspace}/test_results-${SRW_PLATFORM}-${SRW_COMPILER}.txt")"
+
+# Check that the number of tests equals the number of successes, otherwise
+# exit with a non-zero code that equals the difference.
+successes="$(awk '$2 == "SUCCESS" {print $1}' <<< "${results}" | wc -l)"
+if [[ "${#we2e_default_tests[@]}" -ne "${successes}" ]]; then
+    exit "$(( "${#we2e_default_tests[@]}" - "${successes}" ))"
+fi

Externals.cfg

@@ -1,9 +1,9 @@
 [regional_workflow]
 protocol = git
-repo_url = https://github.com/ufs-community/regional_workflow
+repo_url = https://github.com/danielabdi-noaa/regional_workflow
 # Specify either a branch name or a hash but not both.
-#branch = develop
-hash = d45d2ac
+branch = feature/yaml_configs
+#hash = d45d2ac
 local_path = regional_workflow
 required = True