ufs-community · BenjaminBlake-NOAA · Jul 9, 2019 · Jun 24, 2019 · Jun 24, 2019 · Jun 24, 2019
diff --git a/jobs/JFV3CAM_SAR_CHGRES_FCSTBNDY b/jobs/JFV3CAM_SAR_CHGRES_FCSTBNDY
@@ -53,7 +53,7 @@ mkdir -p $COMOUT
 export NWGES=${COMROOT}/${NET}/${envir}/${RUN}.${PDY}/${cyc}
 mkdir -p $NWGES
 
-export INPdir=${COMOUT}/anl.${tmmark}
+export INPdir=${COMOUT}/anl.${dom}.${tmmark}
 mkdir -p ${INPdir}
 
 #####################################

diff --git a/jobs/JFV3CAM_SAR_CHGRES_FIRSTGUESS b/jobs/JFV3CAM_SAR_CHGRES_FIRSTGUESS
@@ -53,7 +53,7 @@ mkdir -p $NWGES
 if [ $tmmark = tm12 ] ; then	# SAR-DA
   export INPdir=$COMOUT/gfsanl.$tmmark
 elif [ $tmmark = tm00 ] ; then	# SAR without DA
-  export INPdir=$COMOUT/anl.$tmmark
+  export INPdir=$COMOUT/anl.${dom}.$tmmark
 fi
 mkdir -p $INPdir
 

diff --git a/jobs/JFV3CAM_SAR_ENVIR b/jobs/JFV3CAM_SAR_ENVIR
@@ -23,7 +23,7 @@ export EXECfv3=$HOMEfv3/exec
 export USHfv3=$HOMEfv3/ush
 
 export FIXfv3=$HOMEfv3/fix
-export FIXsar=$FIXfv3/fix_sar
+export FIXsar=$FIXfv3/fix_sar/${dom}
 export FIXam=$FIXfv3/fix_am
 export FIXco2=$FIXam/fix_co2_proj
 

diff --git a/jobs/JFV3CAM_SAR_FCST b/jobs/JFV3CAM_SAR_FCST
@@ -61,7 +61,7 @@ export CYCfcst=`echo $CYCLEfcst | cut -c 9-10`
 
 export GUESSdir=$COMOUT/guess.${tmmark_next}
 mkdir -p $GUESSdir
-export ANLdir=$COMOUT/anl.${tmmark_next}
+export ANLdir=$COMOUT/anl.${dom}.${tmmark_next}
 mkdir -p $ANLdir
 
 #####################################

diff --git a/jobs/JFV3CAM_SAR_POST b/jobs/JFV3CAM_SAR_POST
@@ -26,7 +26,7 @@ export WGRIB2=${EXECfv3}/wgrib2new
 #####################################
 # Working directories
 #####################################
-export INPUT_DATA=${INPUT_DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/forecast_${tmmark}_${PDY}_${cyc}}
+export INPUT_DATA=${INPUT_DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/forecast_${tmmark}_${dom}_${PDY}_${cyc}}
 export DATA=${DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/${job}_${cyc}}
 if [ -d $DATA ]; then
   rm -rf $DATA

diff --git a/jobs/JFV3CAM_SAR_POST_GOES b/jobs/JFV3CAM_SAR_POST_GOES
@@ -26,7 +26,7 @@ export WGRIB2=${EXECfv3}/wgrib2new
 #####################################
 # Working directories
 #####################################
-export INPUT_DATA=${INPUT_DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/forecast_${tmmark}_${PDY}_${cyc}}
+export INPUT_DATA=${INPUT_DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/forecast_${tmmark}_${dom}_${PDY}_${cyc}}
 export DATA=${DATA:-${mainroot}/${tmpdir}/${USER}/tmpnwprd/${job}_${cyc}}
 if [ -d $DATA ]; then
   rm -rf $DATA

diff --git a/jobs/JFV3CAM_SAR_SENDINIBC b/jobs/JFV3CAM_SAR_SENDINIBC
@@ -3,7 +3,7 @@ set -x
 
 . $HOMEfv3/jobs/JFV3CAM_SAR_ENVIR
 
-export DATA=${mainroot}/${comdir}/${USER}/com/${NET}/${envir}/${RUN}.${PDY}/${cyc}/anl.tm00
+export DATA=${mainroot}/${comdir}/${USER}/com/${NET}/${envir}/${RUN}.${PDY}/${cyc}/anl.${dom}.tm00
 cd $DATA
 
 export pid=$$

diff --git a/modulefiles/theia/fre-nctools b/modulefiles/theia/fre-nctools
@@ -0,0 +1,7 @@
+#%Module#####################################################
+## Module file for fre-nctools
+#############################################################
+module load intel/14.0.2
+module load impi/4.1.3.048
+module load netcdf/4.3.0
+module load hdf5/1.8.14
diff --git a/modulefiles/theia/fv3 b/modulefiles/theia/fv3
@@ -0,0 +1,38 @@
+#%Module######################################################################
+##
+##    NEMS FV3 Prerequisites: Theia/Intel
+
+proc ModulesHelp {} {
+  puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Theia/Intel"
+}
+
+module-whatis "loads NEMS FV3 prerequisites for Theia/Intel"
+
+# NOTE: the "module purge" and loading of the module command are
+# handled by the module-setup.sh (or .csh) script.
+
+##
+## load programming environment
+## this typically includes compiler, MPI and job scheduler
+##
+module load intel/15.1.133
+module load impi/5.1.1.109
+module load netcdf/4.3.0
+module load pnetcdf
+
+##
+## load nwprod libraries
+##
+module use -a /scratch3/NCEPDEV/nwprod/lib/modulefiles
+module load bacio/v2.0.1
+module load sp/v2.0.2
+module load ip/v2.0.0
+module load w3nco/v2.0.6
+module load w3emc/v2.0.5
+module load nemsio/v2.2.3
+
+##
+## load ESMF library for above compiler / MPI combination
+##
+module use /scratch4/NCEPDEV/nems/noscrub/emc.nemspara/soft/modulefiles
+module load esmf/8.0.0bs21
diff --git a/modulefiles/theia/global_chgres b/modulefiles/theia/global_chgres
@@ -0,0 +1,36 @@
+#%Module#####################################################
+## global_chgres component - theia
+#############################################################
+
+# Loading Intel Compiler Suite
+module load intel/14.0.2
+module load impi/5.1.2.150
+
+## this one is missing from nwprod/lib (compiled locally)
+#module use lib/modulefiles
+#module load nemsiogfs/v2.0.1
+
+# Loding nceplibs modules
+module use -a $MOD_PATH
+module load sigio/v2.0.1
+module load w3nco/v2.0.6
+module load w3emc/v2.2.0
+module load sp/v2.0.2
+module load bacio/v2.0.2
+module load nemsio/v2.2.3
+module load nemsiogfs/v2.0.1
+export NEMSIOGFS_INC=/scratch4/NCEPDEV/global/save/glopara/svn/nceplibs/branches/nemsiogfsv2.0.1/include/nemsiogfs
+export NEMSIOGFS_LIB=/scratch4/NCEPDEV/global/save/glopara/svn/nceplibs/branches/nemsiogfsv2.0.1/libnemsiogfs.a
+
+module load ip/v3.0.0
+module load sfcio/v1.0.0
+module load gfsio/v1.1.0
+module load landsfcutil/v2.1.0
+module load netcdf/4.3.0
+module load hdf5/1.8.14
+
+
+export NETCDF_INCLUDE="-I${NETCDF}/include"
+export NETCDF_LDFLAGS_F="-L${NETCDF}/lib -lnetcdf -lnetcdff -L${HDF5}/lib -lhdf5 -lhdf5_fortran"
+
+set FCMP ifort
diff --git a/modulefiles/theia/orog b/modulefiles/theia/orog
@@ -0,0 +1,16 @@
+#%Module#####################################################
+## Module file for orog
+#############################################################
+# Loading Intel Compiler Suite
+module unload intel
+module load intel/16.1.150
+
+module load netcdf/4.3.0
+
+# Loding nceplibs modules
+module use -a $MOD_PATH
+module load ip/v2.0.0
+module load sp/v2.0.2
+module load w3emc/v2.2.0
+module load w3nco/v2.0.6
+module load bacio/v2.0.2