Fix building AFU manual

[mernst]

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[coderabbitai]

📝 Walkthrough

Walkthrough

This pull request modifies build configurations across two files. In the Makefile for annotation-file utilities, the BibTeX inputs path is updated from a relative path to a parent directory reference, and the PDF generation rule is enhanced to explicitly include BibTeX processing via latexmk flags. Additionally, a standalone comment line is removed from a shell script without affecting any functional logic or behavior.

Pre-merge checks and finishing touches

❌ Failed checks (1 warning)

Check name	Status	Explanation	Resolution
Docstring Coverage	⚠️ Warning	Docstring coverage is 0.00% which is insufficient. The required threshold is 80.00%.	You can run @coderabbitai generate docstrings to improve docstring coverage.

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📥 Commits

Reviewing files that changed from the base of the PR and between dac0a60 and 7d49d92.

📒 Files selected for processing (1)

• checker/bin-devel/clone-related.sh (0 hunks)

💤 Files with no reviewable changes (1)

• checker/bin-devel/clone-related.sh

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