image_preprocess

preprocessing script on MR images

This script (batch_run.sh) performs preprocessing steps on MR images, in the following steps:

Decompression on DICOM images
Sort through all DICOM images to create symbolic links and put them into separate folders based on their image sequence
Perform motion correction on the subsequent diffusion MR image

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
DTI_mc_batch.py		DTI_mc_batch.py
README.md		README.md
batch_run.sh		batch_run.sh
check_for_missing_DTI_dicom.py		check_for_missing_DTI_dicom.py
dicom_decompress.py		dicom_decompress.py
dicom_decompress_rename.py		dicom_decompress_rename.py
dicom_divide_batch.py		dicom_divide_batch.py
dicom_header_divider_3_link_dcm2nii.py		dicom_header_divider_3_link_dcm2nii.py
motion_correction_unu_v4.py		motion_correction_unu_v4.py