StarDist - Object Detection with Star-convex Shapes
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Updated
Jul 5, 2024 - Python
StarDist - Object Detection with Star-convex Shapes
Segment Anything for Microscopy
Encoder-Decoder Cell and Nuclei segmentation models
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.
StarDist plugin for napari
Nuclei segmentation and classification (Cancer cells)
MICCAI2023 - TransNuSeg: A Lightweight Multi-Task Transformer for Nuclei Segmentation
Feature extraction from GEOJson nuclei and tissue segmentation maps
An algorithm used for white blood cell nuclei segmentation
GradMix for nuclei segmentation and classification in imbalanced pathology image datasets: MICCAI 2022
The goal is to segment individual nuclei in microscopy images.
H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net
Implementation of U_Net architecture for medical image segmentation purpose.
Predicting breast cancer outcomes using ML.
MICCAI-COMPAY-2021: An automatic nuclei image segmentation based on multi-scale split-attention u-net
compact version of the official hovernet impl in pytorch
Nuclei Segmentation using ResUNet
Performs instance segmentation and classification of nuclei in Multi-Tissue Histology WSIs(generally 100k*100k pixels).
MIC-MAQ for Microscopy Images of Cells - Multi Analyses and Quantifications is an ImageJ/Fiji Plugin for automatic segmentation of nuclei and/or cells for quantifications in other channels including foci detection
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