📊 A universal enrichment tool for interpreting omics data

Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

Brings bulk and pseudobulk transcriptomics to the tidyverse

MSigDB gene sets for multiple organisms in a tidy data format

Lightweight Iterative Gene set Enrichment in R

Enrichment Networks for Pathway Enrichment Analysis

Take command of your set enrichment analyses.

A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries

Interpretation of RNAseq experiments through robust, efficient comparison to public databases

Function Enrichment analysis and Network construction

Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit

Flexible gene set enrichment analysis

GSEA plots in ggplot2

Gene Set Enrichment Class Analysis for heterogeneous RNA sequencing data

Computational protemics analysis of cancer cell-lines at the level of single-cells

R Markdown script to perform bioinformatic analysis of RNA-seq raw count matrices, including DE-testing via DESeq2 and gene set enrichment analysis (GSEA).

Repository of R scripts for analysis of gene expression data

Analysis pipeline to examine how gene pleiotropy influences local adaptation in Silverleaf Sunflowers

some scripts to process transcriptomics and Chip-seq data

Gene Enrichment Identifier