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try to update CI
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selmanozleyen committed May 16, 2024
1 parent 991a313 commit 7da4a43
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2 changes: 2 additions & 0 deletions .github/workflows/test.yaml
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Expand Up @@ -50,6 +50,8 @@ jobs:
- name: Install test dependencies
run: |
python -m pip install --upgrade pip wheel
pip install torch==2.1.0
pip install torch-scatter torch-sparse torch-cluster
- name: Install dependencies
run: |
pip install ${{ matrix.pip-flags }} ".[dev,test]"
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15 changes: 14 additions & 1 deletion README.md
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Expand Up @@ -32,8 +32,21 @@ pip install geome

1. Install the latest development version:


Without GPU support:

```bash
mamba create -n geome python=3.10
mamba activate geome
pip install torch==2.1.0
pip install torch-scatter torch-sparse torch-cluster
pip install git+https://github.com/theislab/geome.git@main
```

With GPU:

```bash
mamba create -n geome python=3.11
mamba create -n geome python=3.10
mamba activate geome
mamba install pytorch==2.1.0 torchvision==0.16.0 torchaudio==2.1.0 pytorch-cuda=12.1 -c pytorch -c nvidia
pip install torch-scatter torch-sparse torch-cluster -f https://data.pyg.org/whl/torch-2.1.0+cu121.html
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