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Awesome Spherical CNN in Medical Imaging

Awesome License: MIT

This is a collection of awesome articles about Spherical CNN, specifically for medical imaging.
Collected by Tian-li Tao @ ShanghaiTech Univ.

Overview

Review

Benchmarking Geometric Deep Learning for Cortical Segmentation and Neurodevelopmental Phenotype Prediction
[paper] [code]

Deep learning in cortical surface-based neuroimage analysis: a systematic review
[paper]

基于球面神经网络的大脑皮层数据处理与分析
[paper]

Spherical CNN

Spherical CNNs. In: International Conference on Learning Representations
[paper]

Learning so (3) equivariant representations with spherical CNNS
[paper]

Clebsch-gordan nets: a fully fourier space spherical convolutional neural network
[paper]

DeepSphere: a graph-based spherical CNN
[paper]

Prediction

Spherical deformable u-net: Application to cortical surface parcellation and development prediction
[paper]

Multi-task Joint Prediction of Infant Cortical Morphological and Cognitive Development
[paper]

Prediction of Infant Cognitive Development with Cortical Surface-Based Multimodal Learning
[paper]

Geometric Convolutional Neural Network for Analyzing Surface-Based Neuroimaging Data
[paper]

Parcellation

Spherical U-Net on Cortical Surfaces: Methods and Applications
[paper][code]

Geometric Deep Learning of the Human Connectome Project Multimodal Cortical Parcellation
[paper]

SPHARM-Net: Spherical Harmonics-based Convolution for Cortical Parcellation
[paper][code]

Cortical Surface Parcellation using Spherical Convolutional Neural Networks
[paper][code]

Spherical U-Net for infant cortical surface parcellation
[paper]

Deformable Spherical Transformer for Cerebellar Surface Parcellation
[paper]

Weakly Supervised Cerebellar Cortical Surface Parcellation with Self-Visual Representation Learning
[paper]

Registration

Unsupervised Multimodal Surface Registration with Geometric Deep Learning
[paper] [code]

Unsupervised learning for spherical surface registration
[paper]

A Deep network for joint registration and parcellation of cortical surfaces
[paper]

S3Reg: superfast spherical surface registration based on deep learning
[paper]

Cortical surface registration using unsupervised learning
[paper]

Others

Surface Masked AutoEncoder: Self-Supervision for Cortical Imaging Data
[paper][code]

A Deep Generative Model of Neonatal Cortical Surface Development
[paper]

Surface vision transformers: Attention-based modelling applied to cortical analysis
[paper][code]

Surface Generative Modelling of Neurodevelopmental Trajectories
[paper][ code]

The Multiscale Surface Vision Transformer
[paper][code]

Geometric Constrained Deep Learning for Motion Correction of Fetal Brain Mr Images
[paper]

A Spherical Convolutional Neural Network for White Matter Structure Imaging via dMRI
[paper]

Discriminative analysis of the human cortex using spherical CNNs-a study on Alzheimer's disease diagnosis
[paper]

Spherical transformer for quality assessment of pediatric cortical surfaces
[paper]

Encoding Human Cortex Using Spherical CNNs - A Study on Alzheimer's Disease Classification
[paper]

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