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1. bioforensics/MicroHapDB bioforensics/MicroHapDB Public

   Portable database of microhaplotype marker and allele frequency data

   Python 9 4

2. kevlar-dev/kevlar kevlar-dev/kevlar Public

   Reference-free variant discovery in large eukaryotic genomes

   Python 41 9

3. dib-lab/khmer dib-lab/khmer Public

   In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

   Python 757 295

4. BrendelGroup/AEGeAn BrendelGroup/AEGeAn Public

   Integrated toolkit for analysis and evaluation of annotated genomes

   C 24 10

5. tag tag Public

   Genome annotation data analysis and management implemented in pure Python

   Python 8 1

6. BrendelGroup/pdom-genome-project BrendelGroup/pdom-genome-project Public

   Polistes dominula genome project, a collaboration between the Insect Sociogenomics Lab at Iowa State University and the Computational Genome Science Lab at Indiana University

   Makefile 7 1