This section of the reference documentation suggest that an indicator would be auto-configured in case MongoDB was in use. Upon close inspection it seems that the indicator expects a MongoTemplate which is not available if you use the new reactive APIs. I guess an additional one is needed based on ReactiveMongoOperations.
I guess the same could be done for Cassandra and Redis.
I'd also suggest to refactor the current one to work against MongoOperations instead of the implementation class.