Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

moltype needs to be fixed in singlesketch #462

Open
mr-eyes opened this issue Oct 1, 2024 · 1 comment · May be fixed by #515
Open

moltype needs to be fixed in singlesketch #462

mr-eyes opened this issue Oct 1, 2024 · 1 comment · May be fixed by #515

Comments

@mr-eyes
Copy link
Member

mr-eyes commented Oct 1, 2024

wait! no, moltype needs to be fixed: the moltype that is needed at the beginning of sketching is actually the input moltype, not the sketch moltype -- i.e. is the FASTA file DNA or protein? I think an --input-moltype param might be needed.

@ctb @mr-eyes

Originally posted by @bluegenes in #459 (comment)

@ctb
Copy link
Collaborator

ctb commented Nov 12, 2024

also need to check - can you use multiple ksize in a param string? k=21,k=31 etc.

@ctb ctb linked a pull request Nov 13, 2024 that will close this issue
7 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging a pull request may close this issue.

2 participants