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Achievements

Achievement: Galaxy BrainAchievement: Pair Extraordinairex3Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx4Achievement: Arctic Code Vault ContributorAchievement: Starstruckx2

Achievements

Achievement: Galaxy BrainAchievement: Pair Extraordinairex3Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx4Achievement: Arctic Code Vault ContributorAchievement: Starstruckx2

Organizations

@dib-lab @ngs-docs @EarthMicrobiomeProject @beacon-center @everpub @spacegraphcats @osfclient @speeding-up-science-workshops @ucdavisdatalab

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  1. sourmash-bio/sourmash Public

    Quickly search, compare, and analyze genomic and metagenomic data sets.

    Python 501 83

  2. spacegraphcats/spacegraphcats Public

    Indexing & querying large assembly graphs -- in space, no one can hear you miao!

    Standard ML 117 15

  3. dib-lab/charcoal Public

    Remove contaminated contigs from genomes using k-mers and taxonomies.

    Python 56 1

  4. dib-lab/genome-grist Public

    map Illumina metagenomes to genomes!

    Jupyter Notebook 38 6

1,822 contributions in the last year

Contribution Graph
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Activity overview

Contributed to sourmash-bio/sourmash, sourmash-bio/sourmash_plugin_branchwater, sourmash-bio/sourmash_plugin_betterplot and 98 other repositories
Loading A graph representing ctb's contributions from April 14, 2024 to April 18, 2025. The contributions are 45% commits, 19% issues, 18% pull requests, 18% code review. 18% Code review 19% Issues 18% Pull requests 45% Commits

Contribution activity

April 2025

Created 27 commits in 6 repositories
Created 1 repository

Created a pull request in sourmash-bio/sourmash that received 2 comments

MRG: fix deprecations

NOTE: PR into #3604 This does a large-scale replace of sourmash.load_one_signature with sourmash_args.load_one_signature, as well as other cleanups…

+183 −169 lines changed • 2 comments
Opened 13 other pull requests in 3 repositories
Reviewed 22 pull requests in 3 repositories
Opened 2 issues in 1 repository
sourmash-bio/sourmash 2 open
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