You can easily create your own Breedbase site using this repo. For developers, the breedbase_dockerfile repo is recommended.
A recent issue with the installation process has been fixed. If you would like to attempt a re-install, you may have to remove the old database docker. Please backup as needed before!
As a prerequisite, you have to install docker, docker compose, and git on your machine; follow the instructions appropriate for your operating system.
After the installation of the prerequisites, clone this repo and start the docker from within the repo directory, then enter the docker and run the db update script:
git clone https://github.com/solgenomics/breedbase_site
cd breedbase_site
docker compose up -d
# the db patches should now be run automatically, so no need to run them manually
A webpage should become accessible through a browser at localhost:8099.
You can login using the following credentials:
username: admin
password: password # update asap, see below!
That's all there is to it!
However, you should change the password as soon as possible:
# log into docker
docker exec -it bb_web bash
# log into database
psql -h bb_db -U postgres breedbase
# change password
set search_path=sgn;
begin;
update sgn_people.sp_person set password=crypt('your new password', gen_salt('bf')) where username = 'admin';
commit;
# quit database
\q
To update the docker, run the following steps:
cd breedbase_site
docker pull breedbase/breedbase:latest
docker compose down
docker compose up -d
docker exec -it bb_web bash
db/run_all_patches.pl -h bb_db -u postgres -p postgres -d breedbase -e admin -s 150