Added back tax limit 10

soedinglab · Jan 9, 2025 · 3c9b935 · 3c9b935
1 parent 3c5492b
commit 3c9b935
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/backend/alignment.go b/backend/alignment.go
@@ -333,7 +333,8 @@ func ReadAlignments[T any, U interface{ ~uint32 | ~int64 }](id Id, entries []U,
 		reader.Delete()
 
 		// Read the taxonomy report
-        taxonomyReportPath := filepath.Join(base, "alis_" + db + "_report")
+        // taxonomyReportPath := filepath.Join(base, "alis_" + db + "_report")
+		taxonomyReportPath := filepath.Join(base, "alis_BFVD_report")
         taxonomyReport, _ := ReadTaxonomyReport(taxonomyReportPath)
 
 		base := filepath.Base(name)

diff --git a/frontend/SankeyDiagram.vue b/frontend/SankeyDiagram.vue
@@ -151,7 +151,7 @@ export default {
 			this.sankeyRankColumns.forEach((rank) => {
 				if (nodesByRank[rank]) {
 					// Sort nodes by clade_reads in descending order and select the top nodes
-					const topNodes = nodesByRank[rank].sort((a, b) => b.clade_reads - a.clade_reads).slice(0, !isFullGraph ? nodesByRank[rank].length : 20); // Don't apply taxaLimit when parsing fullGraphData
+					const topNodes = nodesByRank[rank].sort((a, b) => b.clade_reads - a.clade_reads).slice(0, isFullGraph ? nodesByRank[rank].length : 10); // Don't apply taxaLimit when parsing fullGraphData
 					nodes.push(...topNodes);
 				}
 			});
@@ -181,7 +181,7 @@ export default {
 			});
 			return { nodes, links };
 		},
-		
+
         // Main function for rendering Sankey
 		createSankey(items) {
 			const { nodes, links } = this.parseData(items);