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1. GeneExpression-MachineLearning GeneExpression-MachineLearning Public

   Supervised Machine Learning for Gene Expression Analysis

   Jupyter Notebook 1

2. ImageColorAnalysis ImageColorAnalysis Public

   ImageColorAnalysis is a repository with a Python script for color analysis in images using ImageMagick. It generates bash scripts for individual JPG images to analyze specific colors. It provides a…

   Python 2

3. small-RNA-Seq-Analysis small-RNA-Seq-Analysis Public

   scripts and resources for performing miRNA sequencing analysis using tools like mirPRo and miRDeep2. Explore the code to process reads, map them to the genome, quantify known miRNAs, identify novel…

   Shell 2

4. RNASeq-Analysis-JunctionSeq-QoRTs RNASeq-Analysis-JunctionSeq-QoRTs Public

   This repository provides scripts for RNA-Seq data analysis using JunctionSeq and QoRTs, enabling quality control, differential splicing analysis, and generation of browser tracks.

   R

5. Deseq2-Annotated-Data-Processing Deseq2-Annotated-Data-Processing Public

   Filter DE genes based on log2Folchange, FDR value or both

   Python

6. splicing-events-calculation splicing-events-calculation Public

   Calculate five major splicing events using rMATS followed by annotation

   Jupyter Notebook