Jay Shendure's lab at the University of Washington
- 25 followers
- University of Washington, Seattle
- http://krishna.gs.washington.edu/
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mouse-atac
mouse-atac PublicRepo for website and other code for mouse sci-ATAC-seq project
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single-cell-ko-screens
single-cell-ko-screens PublicRepository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hill, McFaline-Figueroa et al.
Repositories
- AP_human_gastruloids Public
Scripts for data processing and analysis used in the manuscript 'Dual-patterned Pluripotent Stem Cells Self-Organize into a Human Embryo Model with Extended Anterior-Posterior Patterning.'
shendurelab/AP_human_gastruloids’s past year of commit activity - Neural_CRE_MPRA_CRISPRa Public
Analysis and visualization code for "Large-scale discovery of neural enhancers for cis-regulation therapies"
shendurelab/Neural_CRE_MPRA_CRISPRa’s past year of commit activity - ENGRAM Public
shendurelab/ENGRAM’s past year of commit activity - Lindel Public
shendurelab/Lindel’s past year of commit activity - Prime-del Public
shendurelab/Prime-del’s past year of commit activity - Diversified_Parts Public
Analysis and visualization code for "Diversified, miniaturized and ancestral parts for mammalian genome engineering and molecular recording"
shendurelab/Diversified_Parts’s past year of commit activity - EBTF Public
shendurelab/EBTF’s past year of commit activity - scQers Public
Scripts, plasmid maps, and amplicon maps for: Multiplex profiling of developmental enhancers with quantitative, single-cell expression reporters
shendurelab/scQers’s past year of commit activity - MPRAflow Public
A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data
shendurelab/MPRAflow’s past year of commit activity
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