keep scope of linked map local

seqeralabs · Jul 25, 2024 · 3b22564 · 3b22564
1 parent 1248bbb
commit 3b22564
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/modules/local/seqera_runs_dump/functions.nf b/modules/local/seqera_runs_dump/functions.nf
@@ -48,8 +48,8 @@ Map getRunMetadata(meta, log, api_endpoint, trustStorePath, trustStorePassword)
         if (workspaceId) {
             def workflowResponse = client.get(path: "/workflow/${runId}", query: ["workspaceId":workspaceId], headers: authHeader)
             if (workflowResponse.statusCode == 200) {
-                metaMap = workflowResponse?.json?.workflow?.subMap("runName", "workDir", "projectName")
-                config = new ConfigSlurper().parse( workflowResponse?.json?.workflow?.configText )
+                def metaMap = workflowResponse?.json?.workflow?.subMap("runName", "workDir", "projectName")
+                def config = new ConfigSlurper().parse( workflowResponse?.json?.workflow?.configText )
                 metaMap.fusion =  config.fusion.enabled
 
                 return metaMap ?: [:]

diff --git a/workflows/nf_aggregate/main.nf b/workflows/nf_aggregate/main.nf
@@ -21,7 +21,7 @@ workflow NF_AGGREGATE {
     skip_multiqc              //     val: Skip MultiQC
     java_truststore_path      //     val: Path to java truststore if using private certs
     java_truststore_password  //     val: Password for java truststore if using private certs
-    
+
     main:
 
     ch_versions = Channel.empty()
@@ -30,6 +30,7 @@ workflow NF_AGGREGATE {
     //
     // MODULE: Fetch run information via the Seqera CLI
     //
+
     SEQERA_RUNS_DUMP (
         ids,
         seqera_api_endpoint,