feat: Change template for HuggingFace. #2554
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: test (private) | |
on: | |
pull_request: | |
branches: [main, "[0-9]+.[0-9]+.x"] | |
types: [labeled, synchronize, opened] | |
schedule: | |
- cron: "0 10 * * *" # runs at 10:00 UTC (03:00 PST) every day | |
workflow_dispatch: | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
# if PR has label "private tests" or "all tests" or if scheduled or manually triggered or on push | |
if: >- | |
( | |
contains(github.event.pull_request.labels.*.name, 'private tests') || | |
contains(github.event.pull_request.labels.*.name, 'all tests') || | |
contains(github.event_name, 'schedule') || | |
contains(github.event_name, 'workflow_dispatch') || | |
contains(github.event_name, 'push') | |
) | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -e {0} # -e to fail on error | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest] | |
python: ["3.12"] | |
permissions: | |
id-token: write | |
name: unit | |
env: | |
OS: ${{ matrix.os }} | |
PYTHON: ${{ matrix.python }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
audience: sts.amazonaws.com | |
role-to-assume: arn:aws:iam::${{ secrets.AWS_IAM }}:role/scvi-tools_private_test | |
aws-region: us-west-1 | |
role-duration-seconds: 3600 # generous upper limit for the duration of the test | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python }} | |
cache: "pip" | |
cache-dependency-path: "**/pyproject.toml" | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip wheel uv | |
python -m uv pip install --system "scvi-tools[tests] @ ." | |
- name: Run pytest | |
env: | |
MPLBACKEND: agg | |
PLATFORM: ${{ matrix.os }} | |
DISPLAY: :42 | |
HF_API_TOKEN: ${{ secrets.HF_API_TOKEN }} | |
COLUMNS: 120 | |
run: | | |
coverage run -m pytest -v --color=yes --private | |
coverage report | |
- uses: codecov/codecov-action@v4 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} |