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feat: Change template for HuggingFace. #2554

feat: Change template for HuggingFace.

feat: Change template for HuggingFace. #2554

name: test (private)
on:
pull_request:
branches: [main, "[0-9]+.[0-9]+.x"]
types: [labeled, synchronize, opened]
schedule:
- cron: "0 10 * * *" # runs at 10:00 UTC (03:00 PST) every day
workflow_dispatch:
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test:
# if PR has label "private tests" or "all tests" or if scheduled or manually triggered or on push
if: >-
(
contains(github.event.pull_request.labels.*.name, 'private tests') ||
contains(github.event.pull_request.labels.*.name, 'all tests') ||
contains(github.event_name, 'schedule') ||
contains(github.event_name, 'workflow_dispatch') ||
contains(github.event_name, 'push')
)
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -e {0} # -e to fail on error
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python: ["3.12"]
permissions:
id-token: write
name: unit
env:
OS: ${{ matrix.os }}
PYTHON: ${{ matrix.python }}
steps:
- uses: actions/checkout@v4
- uses: aws-actions/configure-aws-credentials@v4
with:
audience: sts.amazonaws.com
role-to-assume: arn:aws:iam::${{ secrets.AWS_IAM }}:role/scvi-tools_private_test
aws-region: us-west-1
role-duration-seconds: 3600 # generous upper limit for the duration of the test
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python }}
cache: "pip"
cache-dependency-path: "**/pyproject.toml"
- name: Install dependencies
run: |
python -m pip install --upgrade pip wheel uv
python -m uv pip install --system "scvi-tools[tests] @ ."
- name: Run pytest
env:
MPLBACKEND: agg
PLATFORM: ${{ matrix.os }}
DISPLAY: :42
HF_API_TOKEN: ${{ secrets.HF_API_TOKEN }}
COLUMNS: 120
run: |
coverage run -m pytest -v --color=yes --private
coverage report
- uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}