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Tutorials infrastructure: switch to text-based notebook workflow #59

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wants to merge 38 commits into from
Closed

Tutorials infrastructure: switch to text-based notebook workflow #59

wants to merge 38 commits into from

Commits on Jun 23, 2021

  1. Adding jupytext options to Makefile

    alexdesiqueira committed Jun 23, 2021
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  2. Migrating from the "old" format: toc is not a mapping

    alexdesiqueira committed Jun 23, 2021
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  3. Moving builds to their folder

    alexdesiqueira committed Jun 23, 2021
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  4. Building site instead of book

    alexdesiqueira committed Jun 23, 2021
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  5. Adding Makefile on website

    alexdesiqueira committed Jun 23, 2021
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  6. Removing website Makefile refs

    alexdesiqueira committed Jun 23, 2021
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  7. Adding website/conf.py

    alexdesiqueira committed Jun 23, 2021
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  8. Starting index.md

    alexdesiqueira committed Jun 23, 2021
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  9. Adding Indices and tables to index.md

    alexdesiqueira committed Jun 23, 2021
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  10. Ignoring website local builds

    alexdesiqueira committed Jun 23, 2021
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  11. An example — testing jupytext conversion

    alexdesiqueira committed Jun 23, 2021
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  12. Adding example to toctree on index.md

    alexdesiqueira committed Jun 23, 2021
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  13. Creating a link from website/images to ../images

    alexdesiqueira committed Jun 23, 2021
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  14. Testing toc structure

    alexdesiqueira committed Jun 23, 2021
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  15. Organizing folders

    alexdesiqueira committed Jun 23, 2021
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Commits on Jun 24, 2021

  1. Changing intro.md

    alexdesiqueira committed Jun 24, 2021
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Commits on Sep 13, 2021

  1. Testing python instead of ipython3 on {code-cell}s

    alexdesiqueira committed Sep 13, 2021
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Commits on Sep 14, 2021

  1. jb-article -> jb-book

    alexdesiqueira committed Sep 14, 2021
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  2. Adding more converted notebooks

    alexdesiqueira committed Sep 14, 2021
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Commits on Sep 15, 2021

  1. Changing - to _ on adv3 filename

    alexdesiqueira committed Sep 15, 2021
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  2. Adding some of the newly converted notebooks to the toc

    alexdesiqueira committed Sep 15, 2021
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Commits on Dec 2, 2021

  1. Fix tabs in Makefile

    @stefanv
    stefanv committed Dec 2, 2021
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  2. Require book directory for building html

    @stefanv
    stefanv committed Dec 2, 2021
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  3. Fix incorrect build path

    @stefanv
    stefanv committed Dec 2, 2021
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  4. website -> site

    Alexandre de Siqueira authored Dec 2, 2021
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  5. website -> site

    Alexandre de Siqueira authored Dec 2, 2021
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  6. website -> site

    Alexandre de Siqueira authored Dec 2, 2021
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Commits on Dec 3, 2021

  1. Refactor the build system

    @stefanv
    stefanv committed Dec 3, 2021
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  2. Fix skdemo

    @stefanv
    stefanv committed Dec 3, 2021
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  3. Fix up color_and_exposure module

    @stefanv
    stefanv committed Dec 3, 2021
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  4. Fix image links

    @stefanv
    stefanv committed Dec 3, 2021
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  5. Fix notebooks; fix skdemo; fix notebook build path

    @stefanv
    stefanv committed Dec 3, 2021
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  6. Require imagecodecs for reading tiffs

    @stefanv
    stefanv committed Dec 3, 2021
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  7. Fix filters imports

    @stefanv
    stefanv committed Dec 3, 2021
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  8. threshold_adaptive is not threshold_local

    @stefanv
    stefanv committed Dec 3, 2021
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  9. Final fixes to adv0_chromosomes

    @stefanv
    stefanv committed Dec 3, 2021
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  10. Fix adv1_lesion_quantification

    @stefanv
    stefanv committed Dec 3, 2021
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Commits on Dec 10, 2021

  1. Fix adv2_microarray

    @stefanv
    stefanv committed Dec 10, 2021
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