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Update base.config
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tkchafin authored Nov 11, 2024
1 parent 6cdd00c commit 71bde84
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion conf/base.config
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@ process {
memory = { check_max( 250.MB * task.attempt, 'memory' ) }
}

withName: 'SAMTOOLS_(STATS|VIEW)' {
withName: 'SAMTOOLS_(STATS|VIEW|FASTQ)' {
memory = { check_max( ((meta.datatype == "pacbio_clr" || meta.datatype == "ont") ? 2.GB : 1.GB) * task.attempt, 'memory' ) }
}

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