Skip to content

Actions: samtools/htslib

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
193 workflow runs
193 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Add error check to bgzf_seek_common() Windows/MinGW-W64 CI #195: Pull request #1896 synchronize by whitwham
March 26, 2025 14:15 4m 46s whitwham:bgzf_seek_error_checking
whitwham:bgzf_seek_error_checking
March 26, 2025 14:15 4m 46s
Add error check to bgzf_seek_common() Windows/MinGW-W64 CI #194: Pull request #1896 synchronize by whitwham
March 25, 2025 15:19 4m 36s whitwham:bgzf_seek_error_checking
whitwham:bgzf_seek_error_checking
March 25, 2025 15:19 4m 36s
Upgrade the default CRAM output to v3.1. Windows/MinGW-W64 CI #193: Pull request #1900 opened by jkbonfield
March 25, 2025 10:22 4m 45s jkbonfield:cram-3.1-default
jkbonfield:cram-3.1-default
March 25, 2025 10:22 4m 45s
Return errors instead of EOF after all I/O errors etc in hts_itr_multi_next/sam_itr_next/sam_read1/vcf_parse/bcf_read Windows/MinGW-W64 CI #192: Pull request #1899 opened by jmarshall
March 24, 2025 11:04 4m 45s jmarshall:error-codes
jmarshall:error-codes
March 24, 2025 11:04 4m 45s
rlen calculation for vcf 4.4, 4.5 Windows/MinGW-W64 CI #191: Pull request #1897 synchronize by vasudeva8
March 24, 2025 10:43 4m 39s vasudeva8:rlen
vasudeva8:rlen
March 24, 2025 10:43 4m 39s
update to work with vcf 4.4 prefixed phasing info (#1861) Windows/MinGW-W64 CI #190: Commit b14fffb pushed by daviesrob
March 24, 2025 10:00 4m 45s develop
develop
March 24, 2025 10:00 4m 45s
Spring 2025 NEWS update. Windows/MinGW-W64 CI #189: Pull request #1898 opened by whitwham
March 21, 2025 15:53 4m 51s whitwham:news_spring_2025
whitwham:news_spring_2025
March 21, 2025 15:53 4m 51s
rlen calculation for vcf 4.4, 4.5 Windows/MinGW-W64 CI #188: Pull request #1897 synchronize by vasudeva8
March 19, 2025 12:36 4m 40s vasudeva8:rlen
vasudeva8:rlen
March 19, 2025 12:36 4m 40s
rlen calculation for vcf 4.4, 4.5 Windows/MinGW-W64 CI #187: Pull request #1897 synchronize by vasudeva8
March 19, 2025 10:07 4m 38s vasudeva8:rlen
vasudeva8:rlen
March 19, 2025 10:07 4m 38s
rlen calculation for vcf 4.4, 4.5 Windows/MinGW-W64 CI #186: Pull request #1897 opened by vasudeva8
March 18, 2025 21:33 4m 40s vasudeva8:rlen
vasudeva8:rlen
March 18, 2025 21:33 4m 40s
Automatically recognize BED vs TSV files and add the option -C, --coords Windows/MinGW-W64 CI #185: Commit cdb3245 pushed by whitwham
March 14, 2025 16:01 4m 48s develop
develop
March 14, 2025 16:01 4m 48s
Add error check to bgzf_seek_common() Windows/MinGW-W64 CI #184: Pull request #1896 opened by whitwham
March 13, 2025 14:23 4m 45s whitwham:bgzf_seek_error_checking
whitwham:bgzf_seek_error_checking
March 13, 2025 14:23 4m 45s
Automatically recognize BED vs TSV files and add the option -C, --coords Windows/MinGW-W64 CI #183: Pull request #1894 opened by pd3
March 7, 2025 15:32 4m 45s pd3:develop
pd3:develop
March 7, 2025 15:32 4m 45s
update to fail on duplicate LN tags, with different LN values (#1882) Windows/MinGW-W64 CI #182: Commit 386de25 pushed by daviesrob
March 6, 2025 09:43 4m 47s develop
develop
March 6, 2025 09:43 4m 47s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #181: Commit 2611e65 pushed by whitwham
February 28, 2025 15:08 5m 1s develop
develop
February 28, 2025 15:08 5m 1s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #180: Pull request #1891 synchronize by whitwham
February 28, 2025 15:01 4m 43s cjw85:patch-1
cjw85:patch-1
February 28, 2025 15:01 4m 43s
This fixes broken tests due to msys2 changes. (#1892) Windows/MinGW-W64 CI #179: Commit 5057d66 pushed by vasudeva8
February 28, 2025 12:18 4m 41s develop
develop
February 28, 2025 12:18 4m 41s
Fix broken tests due to MSYS2 changes. Windows/MinGW-W64 CI #178: Pull request #1892 synchronize by whitwham
February 28, 2025 10:22 4m 43s whitwham:ci_cygwin_fix
whitwham:ci_cygwin_fix
February 28, 2025 10:22 4m 43s
Fix broken tests due to MSYS2 changes. Windows/MinGW-W64 CI #177: Pull request #1892 opened by whitwham
February 28, 2025 10:16 4m 46s whitwham:ci_cygwin_fix
whitwham:ci_cygwin_fix
February 28, 2025 10:16 4m 46s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #176: Pull request #1891 opened by cjw85
February 25, 2025 18:12 4m 46s cjw85:patch-1
cjw85:patch-1
February 25, 2025 18:12 4m 46s
update to tabix with easy validation for a few file formats Windows/MinGW-W64 CI #175: Pull request #1890 opened by vasudeva8
February 19, 2025 12:32 4m 41s vasudeva8:easytbx
vasudeva8:easytbx
February 19, 2025 12:32 4m 41s
exits with return value 1 on tabix parse error Windows/MinGW-W64 CI #174: Commit 243e97e pushed by whitwham
February 14, 2025 14:56 4m 43s develop
develop
February 14, 2025 14:56 4m 43s
update to fail on duplicate LN tags, with different LN values Windows/MinGW-W64 CI #173: Pull request #1882 synchronize by vasudeva8
February 14, 2025 11:57 4m 38s vasudeva8:SQ
vasudeva8:SQ
February 14, 2025 11:57 4m 38s
Make HAVE_ATTRIBUTE_TARGET check also check SSSE3 intrinsics work Windows/MinGW-W64 CI #172: Commit 1682e5e pushed by daviesrob
February 13, 2025 16:24 4m 53s develop
develop
February 13, 2025 16:24 4m 53s
exits with return value 1 on tabix parse error Windows/MinGW-W64 CI #171: Pull request #1887 opened by vasudeva8
February 10, 2025 14:23 5m 19s vasudeva8:tbx
vasudeva8:tbx
February 10, 2025 14:23 5m 19s