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Implement VCF bundles. #1703

Merged
merged 10 commits into from
Sep 3, 2024
Merged

Implement VCF bundles. #1703

merged 10 commits into from
Sep 3, 2024

Commits on Aug 19, 2024

  1. Update bundle content type names.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  2. Update ReadsBundleTest to use more defined constants.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  3. Update ReadsBundleTest to use more defined constants.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  4. Implement VariantBundles.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  5. Update based on GATK usage and rebase.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  6. Code review comments part 1 - temp WIP.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  7. Updates after rebase on new content type strings.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  8. More review comments.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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  9. Code review comments.

    @cmnbroad
    cmnbroad committed Aug 19, 2024
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Commits on Aug 20, 2024

  1. Move bundle JSON schema into a nested map.

    @cmnbroad
    cmnbroad committed Aug 20, 2024
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