Add AsyncFeatureWriterTest

src/test/java/htsjdk/tribble/writer/AsyncFeatureWriterTest.java

@@ -0,0 +1,76 @@
+/*
+ * The MIT License (MIT)
+ *
+ * Copyright (c) 2017 Daniel Gomez-Sanchez
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in all
+ * copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ * SOFTWARE.
+ */
+
+package htsjdk.tribble.writer;
+
+import htsjdk.tribble.Feature;
+import htsjdk.tribble.FeatureCodec;
+import htsjdk.tribble.SimpleFeature;
+import htsjdk.tribble.bed.BEDCodec;
+import htsjdk.tribble.bed.BEDSimpleEncoder;
+import org.testng.annotations.DataProvider;
+import org.testng.annotations.Test;
+
+import java.io.File;
+import java.io.FileNotFoundException;
+import java.io.FileOutputStream;
+import java.util.Arrays;
+import java.util.Collections;
+import java.util.List;
+
+/**
+ * @author Daniel Gomez-Sanchez (magicDGS)
+ */
+public class AsyncFeatureWriterTest extends FeatureWriterTester {
+
+    @Test(dataProvider = "bedFiles")
+    public void readWriteSimpleBed(final File bedFile) throws Exception {
+        testReadWrite(bedFile, (FeatureCodec) new BEDCodec(), (f) -> {
+            try {
+                return new AsyncFeatureWriter<>(new FeatureWriterImpl<>(new BEDSimpleEncoder(), new FileOutputStream(f)));
+            } catch (final FileNotFoundException e) {
+                throw new AssertionError(e.getMessage());
+            }
+        });
+    }
+
+    @DataProvider
+    public Object[][] featuresAndHeaders() {
+        return new Object[][] {
+                {Collections.singletonList(new SimpleFeature("chr1", 1, 100)),
+                        Collections.singletonList("header1")},
+                {Arrays.asList(new SimpleFeature("chr1", 10, 100),
+                        new SimpleFeature("chr2", 1, 100)), Arrays.asList("header1", "header2")}
+        };
+    }
+
+    @Test(dataProvider = "featuresAndHeaders")
+    public void testWriteHeaderAndFeatures(final List<Feature> featuresToWrite,
+            final List<Object> headersToWrite) throws Exception {
+        testWriteHeaderAndFeatures((encoder, file) ->
+                new AsyncFeatureWriter<>(new FeatureWriterImpl(encoder, file)),
+                featuresToWrite, headersToWrite);
+    }
+
+}