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Installing Develop on windows. #61

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HannesStark opened this issue Sep 15, 2020 · 2 comments
Closed

Installing Develop on windows. #61

HannesStark opened this issue Sep 15, 2020 · 2 comments
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documentation enhancement New feature or request prio:low wontfix This will not be worked on
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@HannesStark
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When trying to install the Develop status like so:
pip install -U "bio-embeddings[all] @ git+https://github.com/sacdallago/bio_embeddings.git"
I get an error from jax-unirep that there is no version that satisfies the requirement jaxlib.

Unfortunately, I think jaxlib is not supported for windows right now #438

I can install pip install bio_embeddings. Is it possible to install Develop without jaxlib?

@sacdallago sacdallago added enhancement New feature or request prio:low labels Sep 15, 2020
@sacdallago sacdallago added this to the Future milestone Sep 15, 2020
@sacdallago sacdallago added the wontfix This will not be worked on label Sep 15, 2020
@sacdallago
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Thanks for documenting the issue @HannesStark :)

For now, there won't be a windows-specific packaging plan, as we focus on cluster execution and linux, and unfortunately no one in the dev team runs a windows machine. Nevertheless, as things stand, there are two solutions for this problem already:

  • A fast workaround would be to use docker, but last time we checked (@konstin ) docker-windows didn't support GPU processing
  • A somewhat more space intensive workaround would be to use WSL, which would give you much better "emulation"

And then there's the naive answer, which could get me banned from GitHub: why windows? :D

@konstin
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konstin commented Sep 15, 2020

Self-assigning because I want to document platform support

@konstin konstin self-assigned this Sep 15, 2020
sacdallago pushed a commit that referenced this issue Sep 28, 2020
Document windows to fix GH-61

See merge request sacdallago/bio_embeddings!61
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