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rlouf / mcx Public

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Integration with ArviZ#35

Merged

rlouf merged 29 commits intomasterrlouf/mcx:masterfrom

trace-arvizrlouf/mcx:trace-arvizCopy head branch name to clipboard

Oct 14, 2020

Conversation Commits29 (29)Checks Files changed

Merged

Integration with ArviZ#35
rlouf merged 29 commits intomasterfrom
trace-arviz

Commits

Commits on Oct 6, 2020

add Arviz to the library's dependencies
rlouf
committed
first commit
rlouf
committed
give lax.scan and for_loop chains the same structure
rlouf
committed
minor tweak to the README
rlouf
committed
return ArviZ trace with samples
rlouf
committed
pin arviz version
rlouf
committed
s/log_prob/potential_energy
rlouf
committed
add sample stats
rlouf
committed
s/mean_tree_accept/acceptance_probability (name not enforced)
rlouf
committed
return proposal information during inference
rlouf
committed
done with data except loglikelihood
rlouf
committed
compute contribution to likelihood of each variable
rlouf
committed
return chain and warmup state in update function [facepalm]
rlouf
committed
add loglikelihood to trace
rlouf
committed
return sampler info during warmup
rlouf
committed

Commits on Oct 12, 2020

add warmup informations to trace
rlouf
committed
support inplace addition for trace
rlouf
committed
support trace addition
rlouf
committed
fix formatting with black
rlouf
committed
implement compiler to get loglikelihood contributions
rlouf
committed
fix type issues
rlouf
committed
update tests
rlouf
committed

Commits on Oct 13, 2020

append samples to the chain
rlouf
committed
use isort to format imports
rlouf
committed

Commits on Oct 14, 2020

fix performance issue on sampling with progress bar
rlouf
committed
clean the sampler
rlouf
committed
update hmc evaluator
rlouf
committed
various fixes
rlouf
committed
wrong stacking
rlouf
committed

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