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Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Organizations

@ga4gh @hgvs @biocommons @clingen-data-model

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  1. biocommons/hgvs Public

    Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

    Python 268 95

  2. biocommons/uta Public

    Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

    Python 64 25

  3. biocommons/biocommons.seqrepo Public

    non-redundant, compressed, journalled, file-based storage for biological sequences

    Python 40 35

  4. biocommons/eutils Public

    simplified searching, fetching, and parsing records from NCBI using their E-utilities interface

    Python 60 27

  5. biocommons/bioutils Public

    provides common tools and lookup tables used primarily by the hgvs and uta packages

    Python 22 18

  6. ga4gh/vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 88 37

336 contributions in the last year

Contribution Graph
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Activity overview

Contributed to HGVSnomenclature/hgvs-nomenclature, biocommons/biocommons.seqrepo, biocommons/hgvs and 15 other repositories
Loading A graph representing reece's contributions from April 21, 2024 to April 22, 2025. The contributions are 57% commits, 22% code review, 15% pull requests, 6% issues.

Contribution activity

April 2025

Created 10 commits in 3 repositories
Opened 4 pull requests in 2 repositories

Created an issue in biocommons/biocommons.seqrepo that received 1 comment

[PyPI] Deprecation notice for recent binary distribution upload to 'biocommons.seqrepo'

PyPI reported on Mar 19, 2025, 6:43 AM by email: This email is notifying you of an upcoming deprecation that we have determined may affect you as …

1 comment
Opened 5 other issues in 3 repositories
8 contributions in private repositories Apr 5 – Apr 15
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