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Reactome

A curated pathway database

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  1. reactome2py reactome2py Public

    python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

    Python 28 9

  2. ReactomeGSA ReactomeGSA Public

    R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

    R 22 4

  3. graph-core graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    Java 18 7

  4. pwp-browser pwp-browser Public

    A tool for visualising and interacting with pathways data

    Java 10 7

  5. container container Public

    🚧 Repository for files for running a Reactome production-like environment inside a docker container. Currently, this project's status is "Work-In-Progress". 🚧

    Perl 9 4

  6. content-service content-service Public

    The new Reactome REST API to access the data

    Java 9 5

Repositories

Showing 10 of 129 repositories
  • reactome/search-indexer’s past year of commit activity
    Java 0 3 0 1 Updated Apr 2, 2025
  • server-java-utils Public

    Server side utilities shared across different projects

    reactome/server-java-utils’s past year of commit activity
    Java 0 Apache-2.0 2 0 0 Updated Apr 2, 2025
  • interaction-exporter Public

    Exports molecular interactions inferred from Reactome content

    reactome/interaction-exporter’s past year of commit activity
    Java 5 1 0 1 Updated Apr 2, 2025
  • data-export Public

    Creates the files to be placed in the download section

    reactome/data-export’s past year of commit activity
    Java 2 2 2 2 Updated Apr 2, 2025
  • fireworks-layout Public

    Custom radial layout algorithm to visualise Reactome pathways in a space-filling graph

    reactome/fireworks-layout’s past year of commit activity
    Java 1 3 1 0 Updated Apr 2, 2025
  • diagram-converter Public

    Generates a set of JSON files to be consumed by the Diagram Viewer

    reactome/diagram-converter’s past year of commit activity
    Java 1 3 0 0 Updated Apr 2, 2025
  • graph-importer Public

    Converts the Reactome knowledgebase into a interconnected graph

    reactome/graph-importer’s past year of commit activity
    Java 7 4 0 0 Updated Apr 2, 2025
  • sbml-exporter Public
    reactome/sbml-exporter’s past year of commit activity
    Java 0 1 0 0 Updated Apr 2, 2025
  • reactome/interactors-core’s past year of commit activity
    Java 0 2 0 1 Updated Apr 2, 2025
  • search-core Public
    reactome/search-core’s past year of commit activity
    Java 1 2 0 0 Updated Apr 2, 2025