Skip to content

Add libnetcdf, libhdf5, pydap and cfgrib to xarray.show_versions() #2555

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
shoyer merged 3 commits into from
Nov 14, 2018
Merged

Add libnetcdf, libhdf5, pydap and cfgrib to xarray.show_versions() #2555

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
ef08388
Add libnetcdf, libhdf5, pydap and cfgrib to xarray.show_versions()
shoyer Nov 11, 2018
7f9afc3
More fixup
shoyer Nov 11, 2018
5ada857
Show full Python version string
shoyer Nov 12, 2018
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
31 changes: 27 additions & 4 deletions xarray/util/print_versions.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -44,7 +44,7 @@ def get_sys_info():
(sysname, nodename, release,
version, machine, processor) = platform.uname()
blob.extend([
("python", "%d.%d.%d.%s.%s" % sys.version_info[:]),
("python", sys.version),
("python-bits", struct.calcsize("P") * 8),
("OS", "%s" % (sysname)),
("OS-release", "%s" % (release)),
Expand All @@ -63,9 +63,27 @@ def get_sys_info():
return blob


def netcdf_and_hdf5_versions():
libhdf5_version = None
libnetcdf_version = None
try:
import netCDF4
libhdf5_version = netCDF4.__hdf5libversion__
libnetcdf_version = netCDF4.__netcdf4libversion__
except ImportError:
try:
import h5py
libhdf5_version = h5py.__hdf5libversion__
except ImportError:
pass
return [('libhdf5', libhdf5_version), ('libnetcdf', libnetcdf_version)]


def show_versions(as_json=False):
sys_info = get_sys_info()

sys_info.extend(netcdf_and_hdf5_versions())

deps = [
# (MODULE_NAME, f(mod) -> mod version)
("xarray", lambda mod: mod.__version__),
Expand All @@ -74,14 +92,15 @@ def show_versions(as_json=False):
("scipy", lambda mod: mod.__version__),
# xarray optionals
("netCDF4", lambda mod: mod.__version__),
# ("pydap", lambda mod: mod.version.version),
("pydap", lambda mod: mod.__version__),
("h5netcdf", lambda mod: mod.__version__),
("h5py", lambda mod: mod.__version__),
("Nio", lambda mod: mod.__version__),
("zarr", lambda mod: mod.__version__),
("cftime", lambda mod: mod.__version__),
("PseudonetCDF", lambda mod: mod.__version__),
("rasterio", lambda mod: mod.__version__),
("cfgrib", lambda mod: mod.__version__),
("iris", lambda mod: mod.__version__),
("bottleneck", lambda mod: mod.__version__),
("cyordereddict", lambda mod: mod.__version__),
Expand All @@ -107,10 +126,14 @@ def show_versions(as_json=False):
mod = sys.modules[modname]
else:
mod = importlib.import_module(modname)
ver = ver_f(mod)
deps_blob.append((modname, ver))
except Exception:
deps_blob.append((modname, None))
else:
try:
ver = ver_f(mod)
deps_blob.append((modname, ver))
except Exception:
deps_blob.append((modname, 'installed'))

if (as_json):
try:
Expand Down