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* bring GFS.v16 code changes back to develop branch * update upp lib in hera module * use test hpc stack lib * update upp lib in fv3 for cmake * update post control files * update upp lib in hpcstack on hera, orion and dell and in nceplibs on cray * add change in fv3 dycore ufs-community#35 * remove duplicate read_data in fms_mod in external_ic.F90 Co-authored-by: Jun Wang <junwang-noaa@users.noreply.github.com> Co-authored-by: Dom Heinzeller <climbfuji@ymail.com>
* If ufs.cpld.cpl.r.* files do not reproduce, try nccmp * Modify/add to run cpld 35d bmark tests * Fix nccmp implementation. Fix a bug for 35d tests * Use env var NCCMP * Add hera.intel to rt_35 and rt_wave_35d * Use which to find nccmp path. Apply nccmp to all files that fail cmp. Fix a bug in fv3_ccpp_wrtGauss_netcdf_parallel * Change compare method from nccmp to compare_ncfile.py * Netcdf compare changes on Hera; skip-ci * Netcdf compare changes on WCOSS Dell P3; skip-ci * Modify comopare_ncfile.py * Netcdf compare changes on wcoss cray * Implement Dusan's ecflow fix ufs-community#273 * Move miniconda3 to emc.nemspara on Hera and Orion. Minor change in default_vars.sh
* sync fv3 feature branch * Regression test passed on Hera and Orion, WCOSS_dell, WCOSS_cray, Hera_gnu * Update for FV3 to point to the develop branch
…, updates to other GSL physics (ufs-community#297) - add unified gravity wave drag (called unified ugwp) that combines the UGWP v1 with the GSL drag suite - replace high-resolution SAR (standalone regional) regression test with 25km SAR regression test - update submodule pointer for fv3atm for the changes described in the associated PRs listed below - add `rt_ccpp_dev.conf` that contains the developmental CCPP tests used by GSL and DTC (so that folks are aware of what is tested and how by DTC and GSL, in addition to what is in `rt.conf` and `rt_gnu.conf`) - turn on calls to `gcycle`/`sfcsub` for RUC LSM - regression test configuration scripts for MYNN surface layer - add `fv3_debug` modules for cheyenne.intel and cheyenne.gnu (per request from @DeniseWorthen) - bugfix in `rt.sh` to copy two missing input directories `fv3_regional_quilt_netcdf_parallel` and `fv3_stretched_nest_debug` when creating new baselines using `rt.sh -c` - enable regression testing on Gaea with Intel using the current hpc-stack-nco installation, can now use ecflow - update of CI tests and small bugfix when comparing results using `tests/compare_ncfile.py` from @MinsukJi-NOAA (see ufs-community#299 for details) - note, the update to `tests/compare_ncfile.py` had to be reverted Co-authored-by: DomHeinzeller <58610420+DomHeinzeller@users.noreply.github.com> Co-authored-by: samuel.trahan <Samuel.Trahan@noaa.gov> Co-authored-by: hannah barnes <hannah.barnes@noaa.gov> Co-authored-by: Michael Toy <michael.toy@noaa.gov> Co-authored-by: Samuel Trahan (NOAA contractor) <39415369+SamuelTrahanNOAA@users.noreply.github.com> Co-authored-by: MinsukJi-NOAA <minsuk.ji@noaa.gov>
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…y#524) * point to Jun fv3atm personal fork * add CDEPS submodule * add building instructions * fix issues that came from building * builds CDEPS targets * missed w3nco dep * cleanup use of FoX and remove redundant library links in components * Add 3 files generated by genf90.pl to the CDEPS-interface/ufs directory. (#1) * remove dependency on genf90.pl for CDEPS/share * remove FoX (#2) remove FoX dependency building and use ESMF Config instead. Co-authored-by: Jun Wang <junwang-noaa@users.noreply.github.com> Co-authored-by: BinLi-NOAA <bin.li@noaa.gov> Co-authored-by: Brian Curtis <brian.curtis@noaa.gov>
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