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| This folder contains .Rdata files representing data objects created throughout the compile.R script. | ||
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| - [all-regions-full.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/all-regions-full.RData) - the full table of all regions combined. | ||
| - [all-regions-trimmed.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/all-regions-trimmed.RData) - this table includes only species that are found in 3/4 or more of the years per region. | ||
| - [by-national.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/by_national.RData) - only includes regions not constrained by geography in which surveys have consistent methods through time, shows national averages. | ||
| - [by-region.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/by_region.RData) - for every region and year, the mean location and number of species present, shows regional averages. | ||
| - [by-species.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/by_species.RData) - for each region, year, species combination, the mean location and biomass, shows species averages. | ||
| - [dat_exploded.rds](https://github.com/mpinsky/OceanAdapt/blob/update_2019/data_clean/dat_exploded.Rdata) - for every region and year, all of the species for that region, including zeros if they were not present. | ||
| - [all-regions-full.rds] - the full table of all regions combined. | ||
| - [all-regions-trimmed.rds] - this table includes only species that are found in 3/4 or more of the years per region. | ||
| - [by-national.rds] - only includes regions not constrained by geography in which surveys have consistent methods through time, shows national averages. | ||
| - [by-region.rds] - for every region and year, the mean location and number of species present, shows regional averages. | ||
| - [by-species.rds] - for each region, year, species combination, the mean location and biomass, shows species averages. | ||
| - [dat_exploded.rds] - for every region and year, all of the species for that region, including zeros if they were not present. | ||
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