Ping CV Data Science Training
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- University of California, Los Angeles
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CardioKG
CardioKG PublicPing Lab Intern Project, Summar, 2022:
Link prediction through Graph Neural Network (GNN) model over the Knowledgegraph in the interface of Cardiovascular Disease (CVD) and Drugs.
Jupyter Notebook
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Cardio-NER-BioBERT
Cardio-NER-BioBERT PublicPing Lab Intern Project, Summar, 2022:
Building Named Entity Recognition model with fine tuning BioBERT - a data engineering approach
Jupyter Notebook 1
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Cardio-MeSH2Pgraph
Cardio-MeSH2Pgraph PublicPing Lab Intern Project, Summar, 2022:
Mapping MeSH (ICD codes) to molecular mechanism through protein-protein co-occurance graph -toward high precission medicine
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engineering-protein-graph-data
engineering-protein-graph-data PublicBy Irsyad:
The project documentation and codes in the study of ion-channel in OS-CVD categories implementing graph data API. Summer 2021.
Repositories
- topic_modeling_imputation Public
This repository contains the code associated with the project "Improving Disease Document Labeling in CaseOLAP LIFT via Topic Modeling" Joanne Qiu Alexander Pelletier Ping Lab UCLA Cardiovascular Data Science Summer Internship Program September 15, 2023
pinglab-intern/topic_modeling_imputation’s past year of commit activity - CardioKG Public
Ping Lab Intern Project, Summar, 2022:
Link prediction through Graph Neural Network (GNN) model over the Knowledgegraph in the interface of Cardiovascular Disease (CVD) and Drugs.
pinglab-intern/CardioKG’s past year of commit activity - Multi-Omics-Proteomics-Integration Public
This repository contains the code and input data for the multi-omics proteomics integration project.
pinglab-intern/Multi-Omics-Proteomics-Integration’s past year of commit activity - caseolap-pipeline Public
Samir (akre96): Implementation of the caseOLAP pipeline for mapping relationships between oxidative stress and drugs.
pinglab-intern/caseolap-pipeline’s past year of commit activity - Cardio-MeSH2Pgraph Public
Ping Lab Intern Project, Summar, 2022:
Mapping MeSH (ICD codes) to molecular mechanism through protein-protein co-occurance graph -toward high precission medicine
pinglab-intern/Cardio-MeSH2Pgraph’s past year of commit activity - Cardio-NER-BioBERT Public
Ping Lab Intern Project, Summar, 2022:
Building Named Entity Recognition model with fine tuning BioBERT - a data engineering approach
pinglab-intern/Cardio-NER-BioBERT’s past year of commit activity - pig-proteomics-database Public Forked from sartaajkhan/pig-proteomics-database
Building a bioinformatics tool for generating a more reliable protein sequence database for Sus scrofa cardiac proteomics studies
pinglab-intern/pig-proteomics-database’s past year of commit activity - engineering-protein-graph-data Public
By Irsyad:
The project documentation and codes in the study of ion-channel in OS-CVD categories implementing graph data API. Summer 2021.
pinglab-intern/engineering-protein-graph-data’s past year of commit activity - Oxidative-Stress-Knowledge-Graph Public Forked from josephramirezgit/Oxidative-Stress-Knowledge-Graph
pinglab-intern/Oxidative-Stress-Knowledge-Graph’s past year of commit activity - caseolap-protein-to-CVD-categories Public Forked from josephramirezgit/caseolap-protein-to-CVD-categories
Match UnitRef Protein IDs to CVD disease categories with their corresponding CaseOLAP scores
pinglab-intern/caseolap-protein-to-CVD-categories’s past year of commit activity
