Move worktree bootstrap to the server and persist terminal launch context

apps/server/integration/OrchestrationEngineHarness.integration.ts

@@ -125,7 +125,7 @@ function waitFor<A, E>(
   read: Effect.Effect<A, E>,
   predicate: (value: A) => boolean,
   description: string,
-  timeoutMs = 10_000,
+  timeoutMs = 30_000,
 ): Effect.Effect<A, never> {
   const RETRY_SIGNAL = "wait_for_retry";
   const retryIntervalMs = 10;