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  1. NeuralPLexer NeuralPLexer Public

    Forked from zrqiao/NeuralPLexer

    NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

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  2. GNN_DOVE GNN_DOVE Public

    Forked from kiharalab/GNN_DOVE

    Code for "Protein Docking Model Evaluation by Graph Neural Networks"

    Python

  3. GraDe_IF GraDe_IF Public

    Forked from ykiiiiii/GraDe_IF

    Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)

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  4. DLKcat DLKcat Public

    Forked from SysBioChalmers/DLKcat

    Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic models (ecGEMs) reconstruction

    Python

  5. DeProt DeProt Public

    Forked from engelberger/DeProt

    Code for DeProt. A protein language model with quantizied structure and disentangled attention

    Python

  6. pytorch_geometric pytorch_geometric Public

    Forked from pyg-team/pytorch_geometric

    Graph Neural Network Library for PyTorch

    Python