Deploy pharmr #42
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| workflow_dispatch: | |
| workflow_call: | |
| name: Deploy pharmr | |
| jobs: | |
| deploy: | |
| runs-on: ubuntu-20.04 | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checkout pharmr | |
| uses: actions/checkout@v3 | |
| with: | |
| path: pharmr_repo | |
| - uses: ./pharmr_repo/.github/actions/setup-dependencies | |
| - uses: ./pharmr_repo/.github/actions/setup-pharmr | |
| with: | |
| as-release: true | |
| - uses: ./pharmr_repo/.github/actions/check-pharmr | |
| - name: Get Pharmpy version | |
| working-directory: pharmpy_repo | |
| run: | | |
| echo "pharmpy_version=`git describe --tags`" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Set up git config | |
| working-directory: pharmr_repo | |
| run: | | |
| git config --local user.name "github-actions[bot]" | |
| git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com" | |
| - name: Add changes to DESCRIPTION and documentation | |
| working-directory: pharmr_repo | |
| run: | | |
| git add DESCRIPTION | |
| git add NAMESPACE | |
| git add R/functions_wrapper.R | |
| git add man/ | |
| git status | |
| - name: Check if any files have been staged | |
| working-directory: pharmr_repo | |
| run: | | |
| if [[ "$(git diff --name-only --cached | wc -c)" != "0" ]]; then | |
| echo "has_been_updated=true" >> $GITHUB_ENV | |
| else | |
| echo "has_been_updated=false" >> $GITHUB_ENV | |
| fi | |
| - name: Commit and push changes, tag version | |
| if: ${{ env.has_been_updated == 'true' }} | |
| working-directory: pharmr_repo | |
| run: | | |
| echo "Committing changes" | |
| git commit -m "Update DESCRIPTION/documentation" | |
| echo "Tag version" | |
| git tag "${{ env.pharmpy_version }}" | |
| echo "Push changes" | |
| git push https://$USERNAME:[email protected]/pharmpy/pharmr.git | |
| echo "push tags" | |
| git push --tags https://$USERNAME:[email protected]/pharmpy/pharmr.git | |
| env: | |
| REPO_KEY: ${{secrets.ACCESS_TOKEN}} | |
| USERNAME: github-actions[bot] |