Skip to content
@pfmc-assessments

PFMC assessments

Repositories related to stock assessments for the Pacific Fishery Management Council

The pfmc-assessments GitHub Organization

Repositories used by those involved in stock assessments for U.S. West Coast fish populations associated with the Pacific Fishery Management Council (PFMC). Many of the contributors and users are at NOAA's Northwest and Southwest Fisheries Science Centers.

Some of the commonly used repositories within this organization include

repository use last commit
nwfscSurvey Analysis of the NWFSC trawl surveys date
PacFIN.Utilities Manipulate data from the PacFIN database for assessments date
AgeingError Estimate ageing error given double-reads of hard structures (e.g., otoliths) date
nwfscDiag Diagnostics for west coast groundfish assessments date
sa4ss Generate a stock assessment document from Stock Synthesis output date

There are also numerous repositories associated with U.S. west coast groundfish stock assessments that are hosted here, which are all associated with the topic "stockassessment".

Our internal handbook for PFMC groundfish assessments is another useful resource.

Pinned Loading

  1. nwfscSurvey nwfscSurvey Public

    Tool to pull and process NWFSC West Coast groundfish survey data for use in PFMC groundfish stock assessments

    R 11 9

  2. PacFIN.Utilities PacFIN.Utilities Public

    R code to manipulate data from the PacFIN database for assessments

    R 7 2

  3. nwfscDiag nwfscDiag Public

    Tool to run diagnostics for U.S. West Coast groundfish stock assessments using Stock Synthesis

    R 2

  4. AgeingError AgeingError Public

    Wrapper for tool to estimate ageing error given double-reads of hard structures (e.g., otoliths)

    R 9 5

  5. sa4ss sa4ss Public

    Generate a stock assessment document from Stock Synthesis output

    TeX 12 7

Repositories

Showing 10 of 31 repositories
  • CA_quillback_rockfish_2025 Public

    Quillback rockfish assessment for California in 2025

    pfmc-assessments/CA_quillback_rockfish_2025’s past year of commit activity
    R 0 0 11 0 Updated Jan 18, 2025
  • yellowtail_2025 Public

    Assessment repository for the 2025 assessment of the northern stock of Yellowtail rockfish off the West Coast of the U.S.

    pfmc-assessments/yellowtail_2025’s past year of commit activity
    Scheme 0 0 7 0 Updated Jan 18, 2025
  • indexwc Public

    Estimate indices of abundance for west coast fish species

    pfmc-assessments/indexwc’s past year of commit activity
    R 2 2 15 2 Updated Jan 17, 2025
  • nwfscSurvey Public

    Tool to pull and process NWFSC West Coast groundfish survey data for use in PFMC groundfish stock assessments

    pfmc-assessments/nwfscSurvey’s past year of commit activity
    R 11 9 24 (2 issues need help) 1 Updated Jan 17, 2025
  • sablefish_2025 Public

    Assessment repository for the 2025 assessment of sablefish off the West Coast of the U.S.

    pfmc-assessments/sablefish_2025’s past year of commit activity
    CSS 0 0 23 0 Updated Jan 17, 2025
  • Assessment_Class Public

    2025 UW Stock assessment class

    pfmc-assessments/Assessment_Class’s past year of commit activity
    HTML 17 3 1 0 Updated Jan 17, 2025
  • california-data Public

    This serves as a space to discuss data related to stock assessments for California.

    pfmc-assessments/california-data’s past year of commit activity
    R 3 1 0 0 Updated Jan 15, 2025
  • PacFIN.Utilities Public

    R code to manipulate data from the PacFIN database for assessments

    pfmc-assessments/PacFIN.Utilities’s past year of commit activity
    R 7 2 43 1 Updated Jan 14, 2025
  • pfmc_assessment_handbook Public

    PFMC Groundfish Assessment Best Practices Handbook

    pfmc-assessments/pfmc_assessment_handbook’s past year of commit activity
    TeX 2 1 9 (1 issue needs help) 0 Updated Jan 14, 2025
  • .github Public
    pfmc-assessments/.github’s past year of commit activity
    0 0 1 0 Updated Jan 7, 2025

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…